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berkeley_reactor_200306_planktonic_scaffold_151594

Search features with annotation key words

Displaying items 241-270 of 297 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_151594_239
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241604..242155
DNA (552bp) protein (184aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174601D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL24829.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
berkeley_reactor_200306_planktonic_scaffold_151594_240
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

242152..243993
DNA (1842bp) protein (614aa)
Amidohydrolase 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAI1_9BACT
Amidohydrolase 3 {ECO:0000313|EMBL:EEF63016.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
amidohydrolase 3
berkeley_reactor_200306_planktonic_scaffold_151594_241
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244003..244848
DNA (846bp) protein (282aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ISG9_9BURK
Chloroperoxidase {ECO:0000313|EMBL:AKF86948.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
alpha/beta fold family hydrolase
berkeley_reactor_200306_planktonic_scaffold_151594_242
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244959..246314
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7Q1_AZOS1
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
berkeley_reactor_200306_planktonic_scaffold_151594_243
unknown

Not on your lists

246380..247150
DNA (771bp) protein (257aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_151594_244
unknown

Not on your lists

comp(247172..247759)
DNA (588bp) protein (196aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_151594_245
unknown

Not on your lists

comp(247886..248257)
DNA (372bp) protein (124aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_151594_246
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(248331..249404)
DNA (1074bp) protein (358aa)
O-antigen polymerase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZT69_OPITP
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ACB76523.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_151594_247
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(249793..251547)
DNA (1755bp) protein (585aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0Y2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF90219.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_151594_248
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(251544..252416)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI0003799488
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
berkeley_reactor_200306_planktonic_scaffold_151594_249
unknown

Not on your lists

252555..252872
DNA (318bp) protein (106aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_151594_250
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(252889..254058)
DNA (1170bp) protein (390aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ETO95588.1}; EC=2.4.-.- {ECO:0000313|EMBL:ETO95588.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
epsF; glycosyl transferase (EC:2.4.1.52)
EpsF glycosyl transferase (Group 1) n=2 Tax=Bifidobacterium dentium RepID=D2Q639_BIFDB
berkeley_reactor_200306_planktonic_scaffold_151594_251
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254084..255082)
DNA (999bp) protein (333aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8B9X1_RUBGE
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:KGS07700.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
glycosyl transferases group 1 family protein
berkeley_reactor_200306_planktonic_scaffold_151594_252
unknown

Not on your lists

comp(255500..256798)
DNA (1299bp) protein (433aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_151594_253
Thermus sp. RL, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(256811..257719)
DNA (909bp) protein (303aa)
Glycosyltransferase n=1 Tax=Thermus sp. RL RepID=H7GFQ3_9DEIN
Glycosyltransferase {ECO:0000313|EMBL:EIA39565.1}; TaxID=456163 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. RL.;"
family 2 glycosyl transferase
berkeley_reactor_200306_planktonic_scaffold_151594_254
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(257757..258737)
DNA (981bp) protein (327aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CGA8_ACAM1
glycosyl transferase family protein
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABW30661.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
berkeley_reactor_200306_planktonic_scaffold_151594_255
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(258810..259883)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5YV34_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KCZ96666.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_151594_256
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(259910..260755)
DNA (846bp) protein (282aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F521_9CYAN
UDP-N-acetylmuramate dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_151594_257
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(260774..262222)
DNA (1449bp) protein (483aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QG69_9CYAN
membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGY57853.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
berkeley_reactor_200306_planktonic_scaffold_151594_258
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(262319..263830)
DNA (1512bp) protein (504aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZV53_OPITP
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ACB76720.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_151594_259
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(264000..266297)
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIF0_9BACT
Protein-tyrosine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
berkeley_reactor_200306_planktonic_scaffold_151594_260
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(266349..266942)
DNA (594bp) protein (198aa)
Polysaccharide export protein id=4218420 bin=GWF2_Lentisphaerae_52_8 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Polysaccharide export protein {ECO:0000313|EMBL:EEF63155.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
wza2; polysaccharide biosynthesis/export protein
berkeley_reactor_200306_planktonic_scaffold_151594_261
unknown

Not on your lists

comp(266995..268473)
DNA (1479bp) protein (493aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_151594_262
unknown

Not on your lists

comp(268490..269212)
DNA (723bp) protein (241aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_151594_263
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(269424..272501)
DNA (3078bp) protein (1026aa)
Acriflavin resistance protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP1_9BACT
Acriflavin resistance protein {ECO:0000313|EMBL:EDY20205.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acriflavine resistance protein B
berkeley_reactor_200306_planktonic_scaffold_151594_264
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(272533..273669)
DNA (1137bp) protein (379aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYI0_OPITP
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
berkeley_reactor_200306_planktonic_scaffold_151594_265
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(273662..274204)
DNA (543bp) protein (181aa)
Transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3N5_9BACT
MarR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EIQ01877.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
berkeley_reactor_200306_planktonic_scaffold_151594_266
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(274805..275923)
DNA (1119bp) protein (373aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Beta-N-acetylhexosaminidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZU1_9BACT
bglX; Beta-glucosidase-related glycosidase
berkeley_reactor_200306_planktonic_scaffold_151594_267
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

275944..276519
DNA (576bp) protein (192aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZU0_9BACT
nicotinate/nicotinamide nucleotide adenylyltransferase
berkeley_reactor_200306_planktonic_scaffold_151594_268
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

276512..276865
DNA (354bp) protein (118aa)
iojap-like protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745DE2
iojap-like ribosome-associated protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Displaying items 241-270 of 297 in total

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