ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_151594_260

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(266349..266942)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export protein id=4218420 bin=GWF2_Lentisphaerae_52_8 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 183.0
  • Bit_score: 131
  • Evalue 5.50e-28
Polysaccharide export protein {ECO:0000313|EMBL:EEF63155.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 177.0
  • Bit_score: 127
  • Evalue 1.90e-26
wza2; polysaccharide biosynthesis/export protein similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 182.0
  • Bit_score: 121
  • Evalue 2.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 594
ATGAAAAGTCTCATCGGTTTACTGATCGCAGGAGCCTTGGTGATGGGCTCGGGGACGCAGGCTTCCGCGCAAGCGACGAACGAAGAGCCGTCCAATTACAAACTGACGGCCAACGATTTGCTCGACTTTCGAGTATTTCAGGAGCCCGAACTCGATGCGGTTGTCCGCATCTCCGGCGATGGGACTGCGACATTTCCCTTGGTGGGAAATGTGACCATCGGTGGAAAGACGATCAGCGAGGCAATCGATATTCTCAAGAGCCGCTATAAAGACGGATATCTCGTCAGTCCCCAGGTGAACCTCACCGTGCGAGCCTATGCGAAGCAGCGGTTTACCGTGCTTGGACAGGTACAGAAGCCCGGGGCGTATGAGATGCAGGGTACCGAATCGGTCAGCCTGCTCCAGGCTATCGGGCTGGCTGGAGGGTACACTCGTATTGCCGATCCCGCAAACATCACCGTGAAACGCCGTGAGAGCGATGGCAAGGAGCGGGTGATCCGGTTCAATGCCAAACGCATGGCGCGAGGAGGTGATGATGCTTCCTTCATGCTCAAAGCTGGAGACGTGGTCACCGTGGGAGAGTCCCTCTTTTGA
PROTEIN sequence
Length: 198
MKSLIGLLIAGALVMGSGTQASAQATNEEPSNYKLTANDLLDFRVFQEPELDAVVRISGDGTATFPLVGNVTIGGKTISEAIDILKSRYKDGYLVSPQVNLTVRAYAKQRFTVLGQVQKPGAYEMQGTESVSLLQAIGLAGGYTRIADPANITVKRRESDGKERVIRFNAKRMARGGDDASFMLKAGDVVTVGESLF*