ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_151594_250

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(252889..254058)

Top 3 Functional Annotations

Value Algorithm Source
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ETO95588.1}; EC=2.4.-.- {ECO:0000313|EMBL:ETO95588.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.1
  • Coverage: 363.0
  • Bit_score: 138
  • Evalue 1.60e-29
epsF; glycosyl transferase (EC:2.4.1.52) similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 355.0
  • Bit_score: 137
  • Evalue 5.60e-30
EpsF glycosyl transferase (Group 1) n=2 Tax=Bifidobacterium dentium RepID=D2Q639_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 28.5
  • Coverage: 355.0
  • Bit_score: 137
  • Evalue 2.00e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGCCGATTATGACTGATCACCCCGCCACGGTAAACCGGGTCCTGCAAATCGTGGAGCCGGGTATCGATGGAGTGTTCCGTCATGTCGAGGGGCTGGTGGATTATCTCCACGAGCGCAACATTCCCGTGGATCTCGCCTTTTCATCGCGGAGAGGCTCGGACCGGCTGTTGGCCCTGGTCGAGCGGGTGCGTGAGCGCGGTGGAGAGGCTCTGGACTTGCGGGTGGGGAATACGCCAGAGCCGACGGATGTGCCTGCCATCCTCACCCTGGTCAGGATGACTCGTCGCCGAAAGCCTGCGGTTATCCACGCGCACAGCTCCAAGGCGGGTGCGCTGATGCGTATGCTCCCGAGGCCGCTGCTTGCGCAGCGCACTTTCTACACTCCTCACGCTTACTTTGGGATGAGGAACACAGCCGGGATCAAGGCGCAGGTCTTCAACCAAGTGGAACGCCTGTTGTGGCGGAAGGCACTGACGATCAATGTCTCGCAGGAGGAGGCGGATTTCGCCACTGGTACTCTTGGTGTGAGCGAGCGTCGGTTACGGGTGATACCCAACGGGGTCGATACGCGAAGGTTTCGCTCATTCACAGCTGCGGAGAAGGTCGCGTGGCGCTTGGAGCGAAAGATGCCCGAGGATGCGGTGGTGCTCGGAACTGTGGGAAGATTTAGCTTTCAGAAGAATCCCGAAACCTTGGTGCGCGCTGTGCTGAATGTATTGCCTCGCCATCCACGACTGCACTTTTTCGCCGTGGGCACGGGGGAGCTTGTGGAAGTTTGTGAGCAGATGGTCCGTACGAGTTCTGTGGCAGACAGGTTTCACCGGATTGATTATCTCTCCGATCCTGCTCCGTTCTACGGCGCTATCGATGCCTTTGCCCTCGCTTCACGATACGAGGGGCTTTCTATCGCCGTCCTTGAGGCGTTGTCGTCCGGATTGCCGCTCATCCTCACGGATGTACCGGGCAACAGGACGTTTCTTCACAAGGGTTTGACGCATGCGTGGAGTGCCGCTGCCTGTGACGTGGCTGGCCTTGAGGCTGCCCTCGAAGGCTGGCTGGCTGATCGTGCAGCCAATCGGGCCTCCAACCATCGGGAGATCGCCGATCACGATTTTAGCCTGGACTCTTCTTATGGTCACATCCTGCAGGAGTATGGGATTACCGCCTGA
PROTEIN sequence
Length: 390
MPIMTDHPATVNRVLQIVEPGIDGVFRHVEGLVDYLHERNIPVDLAFSSRRGSDRLLALVERVRERGGEALDLRVGNTPEPTDVPAILTLVRMTRRRKPAVIHAHSSKAGALMRMLPRPLLAQRTFYTPHAYFGMRNTAGIKAQVFNQVERLLWRKALTINVSQEEADFATGTLGVSERRLRVIPNGVDTRRFRSFTAAEKVAWRLERKMPEDAVVLGTVGRFSFQKNPETLVRAVLNVLPRHPRLHFFAVGTGELVEVCEQMVRTSSVADRFHRIDYLSDPAPFYGAIDAFALASRYEGLSIAVLEALSSGLPLILTDVPGNRTFLHKGLTHAWSAAACDVAGLEAALEGWLADRAANRASNHREIADHDFSLDSSYGHILQEYGITA*