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berkeley_reactor_200306_planktonic_scaffold_151594_264

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(272533..273669)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYI0_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 379.0
  • Bit_score: 348
  • Evalue 5.50e-93
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 379.0
  • Bit_score: 348
  • Evalue 1.60e-93
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 378.0
  • Bit_score: 389
  • Evalue 3.00e-105

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Taxonomy

R_Acidobacteria_60_20 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
ATGATTAAAAGAGGAATAGTGATTTTGCTCGCCGTTGCGGCGGGTATCGGCGTCTGGGTCTTGCTGGGAGGAGTCAAAGCTCTCCAGATCAAGGGGATGATGGCAAAGTACGCCAACATGAAAATGCCGCCGGAGGCGGTGACCGCCATCGAGGCGCCAGAGGAGGAGTGGGTGCCAGCCATTCGCGCGGTCGGCTCGACTTCCGCGGTGCAGGGTGTCGTCGTGAGTACAGACCAGCCGGGCATCGTGGAGAAAATCGCCTTTGAGTCGGGTCAGAATGTGAAGCAGGGCGACCTGCTCGTGCAGCTCGATGTCAGCCAGGAACAGGCGCAACTGCGCTCGGCCCAGGCCCAGTTGAAACTGGCAGAGACGAGTCTTCAACGGCAGAAGAACCTGCTGCAGAACCGCGTGAGTTCGCAGGCGGATTTCGATGCGGCCCAGGCCCAATACGACCAGGCCGAGGCGCGAGTGCAGGAGGTTTCCTCGCTGATCAATAAAAAGACGATCCGGGCGCCCTTTACTGGCGTGTTGGGTATTCGCCTGGTGAATCTCGGCCAGTATCTCCAGAGCGGTGCGCAGGTGGCTCCCCTGCAATCGCTGGACCCCATCTACGTAAACTTCTACCTCCCCCAGCAGACAATCGGCTCGATCAAGGCCGGGCAGGAGGTGCTCGTGAAGGCAGACGGTCTGGAGGACAAGATCTTCCACGGCAAGATCAATGCGGTCGATTCCGTCGTCGATGAGGCCACCCGCAACGTGCTGGTGCAAGCGACGTTGGCTAATCCGGAGGGGCTGCTCCGTCCCGGCATGTTTGTCGGCGCCGAGGTGCCGCTGCCCAACATGGAAAAGCGGGTTTTGATCCCTGCGACGGCGGTCCAGTTCGCTCCCTACGGCGACACGGTCTATGTCGTGGAGCAGATGAAGGATCAAAAGGGCGAGTCGTACACCGGGGTGCGCCAGCAGGTAGTAAAAGTGGGTGAGTCCAAGGGCGACCGCGTGTCGATCCTCAGCGGCGTGAAGCCGGGCGAGCAGGTGGTCACCTCGGGTGTCTTCAAGCTGCGGCAGGGTTCCCACGTCCAGATCAACAATACGATCGAGCCCGCCAACAACGAAAAGCCCAAGCCCGAGGATTCCTGA
PROTEIN sequence
Length: 379
MIKRGIVILLAVAAGIGVWVLLGGVKALQIKGMMAKYANMKMPPEAVTAIEAPEEEWVPAIRAVGSTSAVQGVVVSTDQPGIVEKIAFESGQNVKQGDLLVQLDVSQEQAQLRSAQAQLKLAETSLQRQKNLLQNRVSSQADFDAAQAQYDQAEARVQEVSSLINKKTIRAPFTGVLGIRLVNLGQYLQSGAQVAPLQSLDPIYVNFYLPQQTIGSIKAGQEVLVKADGLEDKIFHGKINAVDSVVDEATRNVLVQATLANPEGLLRPGMFVGAEVPLPNMEKRVLIPATAVQFAPYGDTVYVVEQMKDQKGESYTGVRQQVVKVGESKGDRVSILSGVKPGEQVVTSGVFKLRQGSHVQINNTIEPANNEKPKPEDS*