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berkeley_reactor_200306_planktonic_scaffold_151594_292

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 297721..298668

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 320.0
  • Bit_score: 183
  • Evalue 2.70e-43
Two-component hybrid sensor and regulator n=1 Tax=Beggiatoa sp. PS RepID=A7BTK2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 271.0
  • Bit_score: 165
  • Evalue 5.50e-38
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 320.0
  • Bit_score: 183
  • Evalue 5.50e-44

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Taxonomy

Thioploca ingrica → Thioploca → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGCAGGCTTTGTTCGCGAAGGAGTTGTCTGTCCTCAAGGAAGCCGAGGGAGCCTTCACGCGCCATCCGCCCCCGGAGGAGCTGGAACACTACTGCGAGATGCTTGCCGAGCATTATCGCTCGATGCTCGCCCAGATGATGAAGCTGACCAGCATCAGCGATGCCACCCAGCTCCAGCTCAAACGCACGAAACTTGAGCTCTCCTCCGCTCTTTCCAACGTCGAGCGCCTGAATCGCAATCTCGAGGCGGTCAGCCAGGAAAAGGACGAGATCCTCGCTCTGGCCGCTCACGACCTTCGGTCGCCCTTGTCGGGCATTCGCGGCCTCGCGGATCTCATCGTGGAGGAATCCGCGTCTCAAGCCGGAGAAATTCCCTCCTTTGCCCGGGAGATCGTCAACGTCGCCGACGATACGCTCGAGATGATACGGGACATCCTCGACATTTACCGTCTCGATGGCGGCACTCCGTCCGGCCAGCATACAGAGACCCTTCGTATTTCCGACCTGCTCGCAGAAGCCTCGGATATCTCCCGGGCCAATGCGTTGCGCAAGCGCATTACCATGGTAATCGAATCAGTCAATGCCGACTGCGAGATCCTCCTCGAGAAGGCCCTGGTGGTACGCATCCTGGAAAATCTCATTTCCAATGCGCTGAAATACTCCCCGCACGAGAGCGTGGTTACAGTGCGCATCGATATTGAGGGCAAGTTTCTCCAGATCCACGTGCGCGATCAGGGACCGGGCCTCAGCGAAGCGGATCAGGCAAAACTCTTCAAGAAATTTGCGCGCCTTGCCTCCCGCCCCACCGGCGGCGAGTCCTCGATCGGCCTTGGCCTAGCCATTGTCGACCGCATCGTCCAGCATCTTGGCGGTCGCGTCTGGGTGGAAACCACACCCGGCCAGGGCGCCACCTTCCGCGTCGAGCTACCCGTCACTGTGGCCGGGTAG
PROTEIN sequence
Length: 316
MQALFAKELSVLKEAEGAFTRHPPPEELEHYCEMLAEHYRSMLAQMMKLTSISDATQLQLKRTKLELSSALSNVERLNRNLEAVSQEKDEILALAAHDLRSPLSGIRGLADLIVEESASQAGEIPSFAREIVNVADDTLEMIRDILDIYRLDGGTPSGQHTETLRISDLLAEASDISRANALRKRITMVIESVNADCEILLEKALVVRILENLISNALKYSPHESVVTVRIDIEGKFLQIHVRDQGPGLSEADQAKLFKKFARLASRPTGGESSIGLGLAIVDRIVQHLGGRVWVETTPGQGATFRVELPVTVAG*