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berkeley_reactor_200306_planktonic_scaffold_151594_295

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 301964..302308

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein nusG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2H1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 97.0
  • Bit_score: 80
  • Evalue 6.40e-13
nusG; transcriptional activator RfaH, NusG family similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 96.0
  • Bit_score: 78
  • Evalue 9.10e-13
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 111.0
  • Bit_score: 121
  • Evalue 6.00e-25

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 345
ATGGATTACCCGACTCAAAGCCGGCACGTCCGATCAATCCGCGGAGTCCTCACCATCGTGGGATTTGGAGATTCTCCGACCGTCGTGCCCGAGGAGATCGTGGAGGATCTGCGGCGCGAGGTTCAGGATGGGGAAACCATTGTCATCCAGCCACAAATCGAAATCGGCGAGGAGGTCAACGTGATTGCCGGTCCCTTCCAGGGATTACGTGCGGTGGTCAGCAGAGTGCTGCCCGCGCGGGAGCGAGTAGCGGTTTTGCTGGAGGTACTTGGGATGGAGCGCGAGGTGGAGGTTTCGACGAAGGCGGTGCTTCCGGATCAGCCGCATCCGATGTGTAAGGCGTAG
PROTEIN sequence
Length: 115
MDYPTQSRHVRSIRGVLTIVGFGDSPTVVPEEIVEDLRREVQDGETIVIQPQIEIGEEVNVIAGPFQGLRAVVSRVLPARERVAVLLEVLGMEREVEVSTKAVLPDQPHPMCKA*