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berkeley_reactor_200306_planktonic_scaffold_333344_35

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 32864..33103

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S18 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0A3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 79.0
  • Bit_score: 133
  • Evalue 5.80e-29
Ribosomal protein S18 {ECO:0000313|EMBL:EDY20417.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 79.0
  • Bit_score: 133
  • Evalue 8.10e-29
30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 77.0
  • Bit_score: 97
  • Evalue 1.00e-18

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 240
ATGCAGCCGAAAACGCCCAAACGCCGCTCCAATTTCCGCCGCGCGAATCGCACGATGCCGCGCCGTCGCACGGATCTTGCCGAGGAGGCGATCGATTACAAGAACCCTGAGCTCCTGAAGCGCTTCGTTACCGAAAGCGGCAAGATCATTCCTCGCCGTGTCACCGGTATGTCCGCCCGTCTTCACCGCAAGATCACCCGTGAGATCAAGCGTGCTCGTGCGGTTCTGCTGATGAAGTAG
PROTEIN sequence
Length: 80
MQPKTPKRRSNFRRANRTMPRRRTDLAEEAIDYKNPELLKRFVTESGKIIPRRVTGMSARLHRKITREIKRARAVLLMK*