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berkeley_reactor_200306_planktonic_scaffold_333344_64

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(62990..63877)

Top 3 Functional Annotations

Value Algorithm Source
6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ05_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 292.0
  • Bit_score: 389
  • Evalue 2.20e-105
6-phosphogluconate dehydrogenase NAD-binding {ECO:0000313|EMBL:EEF58102.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 292.0
  • Bit_score: 389
  • Evalue 3.10e-105
2-hydroxy-3-oxopropionate reductase similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 296.0
  • Bit_score: 376
  • Evalue 5.40e-102

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 888
ATGCAGACCATTTCCTTTGTCGGCGTCGGCCGCATGGGCCGCAATATGGCCCATCGTCTCAATGAACTCGGCTATCCCATCGGCGGCATCTACGACGTCCGCCCAGAGGCGGCCCGAGAGCTGGCCAGTGAAATCGGCGCGACCGCAACCGACTCCCTGGCGGAAGCCACCCGACTCGGCGATATCATCATCACCGTCGTGACCGATGATGGCGCCATGCGCGCGATCTTCGGCTTGAGCGGCGAAAGCGACCATCTCCTCCGGCATGCAGGAGGCAAAACCTTCATTAACTGCGCCACAGTGACCCCGGCAGTGCACCAGGACGTCGAAAAGGCCGCTTCCGCCGCCGGAGCTTATGCCCTGGAAGCCTGCATGGCCTCCAGCATCACTCAAGCTCGACAGGGCACACTCTACCTCATGGTTGGCGGCCAAAAGGATGTCTTCCTAGCCGTCGAGCCGATCCTGCAAAAGCTCAGTTCCTCACTCCGCTATGTCGGCAAAGCCGGGGAAGCCGCCAAGGTAAAAGCCCTCGTCAACATGGTGATGAACATCAACACCGCCGGCCTCGCCGAAGGCCTCGGCCTGGGCGAAGCACTCGGTCTCGACCTCACCATGCTCCGCGAAGTCTTCTCGCAAACCGGCGCAAACTCCCGGGTGCTGGAAACCGACGGCGAGGACATGCAGAACCGCGAGCACTCCTGCTACTTCTCCGCTGCTCACGCCGCCAAGGACTCGGGCATTGCCCTCGAACTGGCCGGTGATCTCGGCCTCACCCTCCCGCTCGCCGAAGCTACCAAGGCCCAATACGACCGCATGGTCGCCCTTAATCTCGGCGAACTCGACAAATCCGGCGTCGCCGAACTCACCTTCCGCGGGCGGAGCACCTGA
PROTEIN sequence
Length: 296
MQTISFVGVGRMGRNMAHRLNELGYPIGGIYDVRPEAARELASEIGATATDSLAEATRLGDIIITVVTDDGAMRAIFGLSGESDHLLRHAGGKTFINCATVTPAVHQDVEKAASAAGAYALEACMASSITQARQGTLYLMVGGQKDVFLAVEPILQKLSSSLRYVGKAGEAAKVKALVNMVMNINTAGLAEGLGLGEALGLDLTMLREVFSQTGANSRVLETDGEDMQNREHSCYFSAAHAAKDSGIALELAGDLGLTLPLAEATKAQYDRMVALNLGELDKSGVAELTFRGRST*