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berkeley_reactor_200306_planktonic_scaffold_333344_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 71982..74309

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 782.0
  • Bit_score: 745
  • Evalue 5.40e-212
Protein-export membrane protein SecD {ECO:0000313|EMBL:EDY18151.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 782.0
  • Bit_score: 745
  • Evalue 7.60e-212
secD; preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 757.0
  • Bit_score: 593
  • Evalue 7.40e-167

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2328
ATGTCTCCGATCCTTACATTCTTCTCGGGCCTCGGCCTGTTGATCCTCTTCGGCTGGTATTTTGCGACGGATATTCCGTCCCGCAAACGCTGGCTGGGCTTGACCCTGACCATCCTCGTGACGGCCTTCTGCTTGCAGCAGGCCATCCCGCCGGAGAAGAACATCCGCCTGGGCCTGGACCTCAAGGGTGGTACGTCCTTCCTGCTCAAACTGGGAGACAGCGGCAACGATGACATCTCCGCCAACACACTCGATCAGGCGGTGGAGGTCATCCGCAAACGAGTGGACGCCTTCGGCGTGGGCGAGCCGGTCATCACTCCCCAGGGCAAGGACCGTATCCTTGTTCAGATTCCTGGCCTCGATGCCAAGCAGGTGGAGGAGACGAAGAAGTCGCTGCAGCAGGTGGCTCGTCTGGAGTTTGCCACGGTGGCTCCGGGGGGGCAGGCGCTGATCCAGCAGATCGAGTCCGGCCAGATCGTGCGCGACCCCAGCTACGTCATCAAGGACTACAAGACGACCAGCCCCGATGGCACAGAGGTCACCTACAAGCTATTGGTGAAGAAGCGTCCAGAAATCTCCGGCGACCACGTGAAGCATGCTTTCGCGTATTTCGACCAGCGCGGCTGGGGCGTTTCGCTCGAGCTCGACAGTCAGGGAGCCAAGGATTTTGACGCCATCGCGGCCCGTCACCAAGGTGAACAGCTCGCAATCATGCTCGATGGCGAGGTGATTTCGGCTCCGACTTTGCAGGCGAGCGCCTACTTTGGCCACGCCTCCATCACGGGAAACTTCAGTGAGAAGGAAGCCCGTGATCTTTCCAGCTCGCTGGAAAATCCGCTCCGCGTACCGGTCACCATCGAGGAGACTCACACCGTCTCTGCCTCGCTGGGTAGTGATTCCATCCGCAGTGGTATTCTTTCCGGTGTCTTCGGCCTGATCCTTGTCACCATTTTCATGGTGATCTACTACCGTCTGGTCGGATTCATCGCCATTATCGCCCTTATCATCAACTGCATCATGGTGATCGGGTCGCTGAGCATGTTCCACAGCGTGCTGACGCTGCCGGGTATCGCAGGCTTGATCCTGAGCCTTGGTATCGCGGTCGATGCCAACGTGCTCATTTACGAGCGACTGCGCGAGGAACTCGACGCGGGCAAGGGGCTGCGCGCCGCCATCAACTCGTCGTACCAGAAGGCGTTCAGCGCCATCTTCGACGCGCACGTGACCCAGTTCCTCACGGCGGCCATTCTCTACTGGCTGGCCTCTGGCCCGGTGAAGGGCTTTGCCCTCACGCTGACGATCGGTATCGTGGCCTCGATGTTCTCGTCTCTGCTGGTGACCTACACCTGCTTTGACTGGGCATTCCATTTCAATGCCATCAAGAAGGTGACGATGCTGCACCTGATCCGTGCAAAGCGTTTCAACTTCCTCGGGCATGCCCGCCCGTTTGTCTTTGCCTCGATCGCGCTCGTGATTCTCAGCATCGGGTACTTCGCCTGGCGCGGTCCGGCGAATTTCGACGCCGACTTCAAGGGTGGTGATCTGATCGTCTTCTCCTTCAAGGAAAAGGTGACGCCAGATCAGGTGCGAAGCGCTCTGGCAAGCACGCATCTCGACAACAGTGTGATCCAATCCGAGCAGGTGGCGGGGCGCGAATTCATCAGCGTTCGCACTGGCGGTGGACACGCGGCAGAGTTGCAGCAGATCCTCAATGAGAAGTTTCCTTCGTCGGGCCTTGTCTTTGAGCAGGTCGATCATATCGGGCCGCTGGTTGGACAGGAGCTCGCCTACAAGAGCGGTCTCGCCCTCGCCCTCGGTCTTCTTGGTATCTTCATCTACGTTTCCTTCCGCTTCGAGACCTCGTTTGCGGTGGGATCGATCATCGCTCTCCTGCATGACCTGATCATTACGGTCGGTATCTTTGCTCTGAGCGGTCGCGAGCTTTCGCTCATCATGGTGGCGGCGATCCTCACGATCGCGGGCTACTCGATCAACGACAAGATCGTGGTCTTTGACCGAATCCGCAGTGGCTTCCGCGAGCGCGGGCGTCGCTCCATCGCGCAGGTGATGAACGACTCGATCAACGATACGCTTTCGCGTACGATCCTCACGGGTGGCACAGTGCTGCTGACTGTGGTGGCGCTGTACATCTTTGGAGGCCCGGTGCTAAACGACTTTGCCTTCTCGCTGATCGTCGGCGTGTTGATCGGCACCTACTCGTCGATCTTCATCGCGTCACCGATCGTGCTCTGGTGGTCATCGCTGACCACTGGCGGCAAGGGTCTCGATGCCGAACTCATCGAGACGAACGCCGAGAGCAAGGCATGA
PROTEIN sequence
Length: 776
MSPILTFFSGLGLLILFGWYFATDIPSRKRWLGLTLTILVTAFCLQQAIPPEKNIRLGLDLKGGTSFLLKLGDSGNDDISANTLDQAVEVIRKRVDAFGVGEPVITPQGKDRILVQIPGLDAKQVEETKKSLQQVARLEFATVAPGGQALIQQIESGQIVRDPSYVIKDYKTTSPDGTEVTYKLLVKKRPEISGDHVKHAFAYFDQRGWGVSLELDSQGAKDFDAIAARHQGEQLAIMLDGEVISAPTLQASAYFGHASITGNFSEKEARDLSSSLENPLRVPVTIEETHTVSASLGSDSIRSGILSGVFGLILVTIFMVIYYRLVGFIAIIALIINCIMVIGSLSMFHSVLTLPGIAGLILSLGIAVDANVLIYERLREELDAGKGLRAAINSSYQKAFSAIFDAHVTQFLTAAILYWLASGPVKGFALTLTIGIVASMFSSLLVTYTCFDWAFHFNAIKKVTMLHLIRAKRFNFLGHARPFVFASIALVILSIGYFAWRGPANFDADFKGGDLIVFSFKEKVTPDQVRSALASTHLDNSVIQSEQVAGREFISVRTGGGHAAELQQILNEKFPSSGLVFEQVDHIGPLVGQELAYKSGLALALGLLGIFIYVSFRFETSFAVGSIIALLHDLIITVGIFALSGRELSLIMVAAILTIAGYSINDKIVVFDRIRSGFRERGRRSIAQVMNDSINDTLSRTILTGGTVLLTVVALYIFGGPVLNDFAFSLIVGVLIGTYSSIFIASPIVLWWSSLTTGGKGLDAELIETNAESKA*