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berkeley_reactor_200306_planktonic_scaffold_333344_77

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 83046..84107

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A79 similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 344.0
  • Bit_score: 418
  • Evalue 5.30e-114
Twitching motility protein {ECO:0000313|EMBL:EHD20223.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria sp. EniD312.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 324.0
  • Bit_score: 204
  • Evalue 1.30e-49
pilus retraction protein PilT similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 322.0
  • Bit_score: 202
  • Evalue 1.70e-49

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Taxonomy

Brenneria sp. EniD312 → Brenneria → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGCGTCTGCTTGATCTTCCTCCAGATTCTCCTGTTGCCCAGCGCATCAAGGAATTGGCGACTTCGGCCTCTGTCAGTGACTTTTATCTGACCCCGTTTGAGCGCATGAGCTACAAGTACAACGGGCAGTTGATCTACGACGATATCGTCTTTGAGATGGCCGTGCCGGAGCATCTGGAGCCGGGTTGTGATGATAGCGCGATGGATCTCTTCGATTACCGCTTTCGCGTCAACCAGATGGTGACCCGCGGGAGGCTGCGATGGGTGCTTCGTCTCCTGCCGAGCAAGATCCCCGAGCCGGAAGCCATTCGGGTGCCCACGCCAGCCATCAAGGCTTTCCTGGAGGCCAAGAATGGACTCTTCCTAATCTGCGGAGCCACCGGCAGTGGTAAATCGACTACGATTGCGTCGATGGTATTGCACCGGGCGAAACGGCGCCGCGAGCATGTCATTTCCTTTGAGGATCCGATCGAGTTTGTCTATCCGGATGGGCTTCCCTCGCTGGTCTCGCAGCGTGAAATGGGGTCGGACGAGATTGATTTCTCGTTGGCGTTGAGGGCGGCTCTCCGCCAGGCCCCCGACGTGATTATCGTGGGTGAGATTCGAGACGGGGAGACGGCGGAGATTGCCTTGCAGGCGGCGGAGACTGGACACGTGGTTGTAGCCACCCTGCACACATCTTCTGCCTCCCAGACGGTACAGCGATTTCTGAAGCTTATTTCCTCGGATCGGCTGGAAAGCTCTCAGGAGACGCTGGCCGATACGCTGCGGCTCGTGATGTGCCAGCGATTGCTGCTGGATGAGGGATTGGGCAAGCGCTTCCCGATTCATGAGGTGATGCTACAGTACGATGGCATCGTCAACATCATCAGGCGGGGCGATTTCAAGAAGATCGACCAGGAGCTTGAAACGGGCTGGAAGCGCGGAATGTTCAATTTTGAGAAAAGCATCCAGGTCCGTGCGGACGAGGGCTATCGCAGTAGTTCCGGCGTGTCGAAGACCGGAAACTCCTGGGAGGAGATTGAAGAGTATCTGGAGAAACAGGTGGAGGTAGCGCCATGA
PROTEIN sequence
Length: 354
MRLLDLPPDSPVAQRIKELATSASVSDFYLTPFERMSYKYNGQLIYDDIVFEMAVPEHLEPGCDDSAMDLFDYRFRVNQMVTRGRLRWVLRLLPSKIPEPEAIRVPTPAIKAFLEAKNGLFLICGATGSGKSTTIASMVLHRAKRRREHVISFEDPIEFVYPDGLPSLVSQREMGSDEIDFSLALRAALRQAPDVIIVGEIRDGETAEIALQAAETGHVVVATLHTSSASQTVQRFLKLISSDRLESSQETLADTLRLVMCQRLLLDEGLGKRFPIHEVMLQYDGIVNIIRRGDFKKIDQELETGWKRGMFNFEKSIQVRADEGYRSSSGVSKTGNSWEEIEEYLEKQVEVAP*