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berkeley_reactor_200306_planktonic_scaffold_333344_85

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 89313..90575

Top 3 Functional Annotations

Value Algorithm Source
Pilus tip-associated protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A71 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 408.0
  • Bit_score: 426
  • Evalue 3.00e-116
type IV pilin similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 342.0
  • Bit_score: 177
  • Evalue 4.00e-42
Tax=RBG_16_Zixibacteria_53_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 333.0
  • Bit_score: 182
  • Evalue 1.10e-42

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Taxonomy

RBG_16_Zixibacteria_53_22_curated → Zixibacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCTCAAGAAGGTCGTCCTTACCAATATCAACACTGCTCGCTCTTTTCCGGTCATCGTCGATACCGACGATGATCAAAAGGCGATCCTTGGCGCTGGAAAAGCGCCGAACGAGACCGCGGTAGTCACGGATATTGTGGGTGTCGACGAAGCCGTGCATCGCGGCACCACCAAGGCTCCAGGCAAGGAGGAGATGGTGACACTCTTCGGTGGTCTGGCTCGATGCCTGGAGCGGAATATCTCAACTGTCAAGAGTCTGGAGTTGATCGCGGGTCGCTTGTCTACACCCAGGTACCGGGGAGCGGTGGCGGACATCGCGCAGAAAGTGCTAGAGGGAGAGAAGTTGAGTGATTGCTTCGGCATGCATCCCGACCTCTTTACCGAGGACATCGTCGCGTTGATACGGGCAGGTGAGGAGTCGGGCCAGGTGCATGAGATATTTCGTCAAATCTCGCGCTCGAGCGACAAGTCACAACGTGTGTTGAAGAAGTTGCGAGCAGGTTTGATCTACCCTGCCATCGTTCTTGTCCTTTCGTTCGCGGTCGTCATCGTCATGAGTTTCACACTGGTCCCTGCGATTTCGAAGCTCTACGGCGCAATGAACGTGAGTTTACCCGCCGCGACCAAGATGATGATGGCGCTGTCCAATCTTCTCATCCATCAGCCCTATTACCTGATCGTTCCGGTGGTAGGCCTGTTCATGTTGTTCAAGTATTGGTCGAAAATCTACCGAATTCCCAAGGTACAGATCTCCTTAACTCGCGTTCCGACAGTTGGGAATATCATCCGCAAATCGGCGGCCATGGTCAGCTTTCGATGTCTGTCGCTACTGCTCCATTCCAACGTTCGGGTTACGACCGCGTTGGAGATTTCTGCTCGGGCATCAGGGCATGTAGAGTTTGAACAGTTTTTCTTTAGCGTTAGAAATCATATCAATGAAGGTATGTCTCTGCCGGAGGCCTTCCTAATGGAATCTCATCGCCTAGGGCCGGATGGGCGCATGATTGCGGGAGTGGTTCAGATGGCAGGCGAGACAGGCGGGGTCAACGAAATGCTTGATCAAATCGCAGCAGATTATGAGGAGGAGTTGGATATTATTGCGGGACAGCTCGACAAGATTCTTGAGCCAATCATGATCGTGTTTCTCGCTGTTATAGTTGGATTTCTTATTTACTCGATCTACGGCCCCATCTTTAATCTGAGCAAAGTCATCCTTCCTAAGAAGCCGGGGGGCTCTGTGCCAACAGCTCAATCCGCTCGCTAA
PROTEIN sequence
Length: 421
MLKKVVLTNINTARSFPVIVDTDDDQKAILGAGKAPNETAVVTDIVGVDEAVHRGTTKAPGKEEMVTLFGGLARCLERNISTVKSLELIAGRLSTPRYRGAVADIAQKVLEGEKLSDCFGMHPDLFTEDIVALIRAGEESGQVHEIFRQISRSSDKSQRVLKKLRAGLIYPAIVLVLSFAVVIVMSFTLVPAISKLYGAMNVSLPAATKMMMALSNLLIHQPYYLIVPVVGLFMLFKYWSKIYRIPKVQISLTRVPTVGNIIRKSAAMVSFRCLSLLLHSNVRVTTALEISARASGHVEFEQFFFSVRNHINEGMSLPEAFLMESHRLGPDGRMIAGVVQMAGETGGVNEMLDQIAADYEEELDIIAGQLDKILEPIMIVFLAVIVGFLIYSIYGPIFNLSKVILPKKPGGSVPTAQSAR*