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berkeley_reactor_200306_planktonic_scaffold_333344_88

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 93767..94156

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A70 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 116.0
  • Bit_score: 88
  • Evalue 3.50e-15
Uncharacterized protein {ECO:0000313|EMBL:AHZ46163.1}; TaxID=1497524 species="Bacteria; environmental samples.;" source="uncultured bacterium 12-5D.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 124.0
  • Bit_score: 81
  • Evalue 6.00e-13
type IV pilin similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 120.0
  • Bit_score: 64
  • Evalue 2.00e-08

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Taxonomy

uncultured bacterium 12-5D → Bacteria

Sequences

DNA sequence
Length: 390
ATGAAATCCAAGCACCTCTCGTCGGCTCAGGGCTTCAGCCTTGTGGAACTTCTTGTTGTCATTGCTGTGATCGCGATTATCGCGGCCATCGCTATTCCCAACATCGCGAATATTACGGGTCAGGCGACTATCGCCAAGGATCGTCGCAATGCCCAAAATATCGCCTCAGTCGCTGCAGCAGCCCGTGCGGCAGGAACTACAACAACGTGGGACGCTACTGTAACTAACGCTATCAAGCAGCTGATCACCGGGGTTACGGCTCGAGTGAACAATGAAGACCTCGTCTTTAGTGTGTCTCCTATGTCCGATAGCGAACTCGAGGGAGCGGCCGCGTATCTTGCAGTAACCGCTGAAAATATTACATATAGCCCGACGAACGCGGCTCCGTAA
PROTEIN sequence
Length: 130
MKSKHLSSAQGFSLVELLVVIAVIAIIAAIAIPNIANITGQATIAKDRRNAQNIASVAAAARAAGTTTTWDATVTNAIKQLITGVTARVNNEDLVFSVSPMSDSELEGAAAYLAVTAENITYSPTNAAP*