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berkeley_reactor_200306_planktonic_scaffold_333344_92

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 95533..97818

Top 3 Functional Annotations

Value Algorithm Source
general secretory pathway protein E n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A6C similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 692.0
  • Bit_score: 644
  • Evalue 1.30e-181
general secretion pathway protein E similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 488.0
  • Bit_score: 314
  • Evalue 6.50e-83
Tax=RIFCSPHIGHO2_01_SM2F11_52_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 507.0
  • Bit_score: 320
  • Evalue 5.90e-84

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Taxonomy

R_SM2F11_52_17 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 2286
GTGAAAGACAACGACTGGAGATTTTTGCAGGACGCGCTTCGTAGCTGTGGCTACGAGGTCGATGAGTCCGTGTCTCCAGGAGAGGAACTCCACGTCGTGCTCGCGCAGCGAAATGGCGTCCCGTCCGAGCAGGCACTCGAGTGGCTGGCCTCTCTTTTCCAGATTTTGCCGCTCGATCCGAACCGCACGGCCTGCTCGACGCAGGCCGAGGCTCTGTTTCGTCGGCTCGCGGTGGCGACCGACGATGCGGAACCATGGCTGCCGCTGGGCACTGTCGGCCCTCTCTTGATTTGTGCGCATTACAATCCGGCCTGCTCGGAATTTTGGAAGATTCCCGCCGAGTTGCTCGTGCCGGTGCTGATTCCCAAGGCTAAATACGATACCTTGCGTCGGGATGTGTTTGACCGGGTGGCGACCAGTCCACTGGAAAACACTCATCGCATCCGGTTTTCCGAACCTCTTCAGCCTGATCAGGGATACTCCGAGGTGCTCGGATGGATGCTCCGGGAGTTTCCGCTCGATGATGTCGAGGTCCGGGCAAAGCTTGAGCAGGAACGCCGTTCCCTCGCCGAGGGAGCGCACCATGATTACTCGGCCCTGAAGGGATTGCCCCGGCATTACGCCTGTACGGTGCATCATCTTGCGACTGGTGAGCCGTGCTTCAACCCGGAGTACGCACCTTCCCAGACGATGTTTTCCGAGAACATTCTCGAGAAGCATGCGGTTTATCCGATGTATTGCGGGAGCAAGGTGGTCTATCTGCTCTCGGCGGAGAAAAACAATTTCGCCTTTGAGGACGAGTGGCTCTCCAGCGGGAATGAGGCGATCGATTTTCGGACGATCTATGCCGATCGCGACACGATCATGGCGATCATCGCCAAGGAACGCGGTCGGGTGGCAGCCTCCGGTGCGGTCGAGGTTTCCGGGGATCTCACGTACTCGGACGTCGCAAACATCGTCGAGATCGATCTGCAGGAGGTGCAGCGCATCAATCCCTCGAGCATCAATGTGACCTCTGAGCAGGTCGTCCATTGGGTGCTCTACCGGGCGATCACGGGACGCGCGAGCGATCTGCACATCGAGAAGTATTTCAACACAGCCCGGTTCCGTGCGCGTATCGATGGCGAGATGAAGGTCATTCACTCCTGTCCCGAGGAGATGCTGGCCCGATTCATCAGCCTCATCAAAAACTACGCCAATATGGGCCAGCGCCGCCAGGATGCCCAGGACGCCCGGTTCTCGCTCATCCTGGGTAAAAAGCGCGTGGATTGCCGTGTGTCGGCTATTCCGTGCCGCAAGGATCTCCAGAAAATCACGATCCGCTTCCTCGACAAGGATGGGGGCCTGAAGAAGCTCACCGAGCTCAAGCTCTCGCCACGGCAGACGAAGCTGCTGACTGACGCGATGGGCCGCGACCAAGGGCTTATCCTCATCACCGGCCCGACTGGCAGCGGCAAGACGACTACGCTCTACGCTCTGCTCAACAGCATTAATAGCGAGAATATCAACATCCACACGGTGGAGGACCCGATCGAGTACGAGATCGAGGGTATGAACCAGACGCAGACCGACCCGATCCATAATCTGGATTTCGCGGAAGGCCTGCGACGTCTGATGCGTGCCGACCCCGACGTGATCCTTATCGGTGAGTGTCGTGATAACGAAACGGCGATGGCAGCGATCAATGCCGCCCTCACTGGTCACCTCGTGCTGACCACACTGCACGCCAATGACTGCCTGCGCGCCGTAAGCCGGCTCATTTCCATGGGAGTGCCAGCTTATCTGCTGGCAGATTCACTCGCGCTCACCCAGGCCCAGCGTCTTGTGCGCCGCCTATGCACTTTCTGCAAACGGCCGACCCCGATCACGCCTGAGATTCAGGCGATTTTTGACGCCAACATGGTTCCGATCAAACCCGAGGTGACGTCGATTTATTCGAAGAACGGTTGCCCCGAGTGCAATGAGAGTGGATACAGCGGACGTCTGGCGTTGATGGAACTCGTAGCTATCGACCATGCACTGGGCGATTTGATCTCCCGTAATGCTCCGCAGAGTCAGATGCGCCGCCTTGCCTTCCGGCAGGGGATGCTGACCCTGTATCAGGAGGGGCTGGTGCAGGTCCTCAATGGCAATACCTCCCTCGAGGAGATTAGCTGCCTGAGCTACACCTCCATCACCGCTGAGAACCACGACGACGATCCGCCGGATGGCAAGATCGTGGGCATGCCTGTCCGCCGGACTCCTGCCGTGGAAAACGAGGTGCTCGAGTCGAAGTTCGAGGCCTGA
PROTEIN sequence
Length: 762
VKDNDWRFLQDALRSCGYEVDESVSPGEELHVVLAQRNGVPSEQALEWLASLFQILPLDPNRTACSTQAEALFRRLAVATDDAEPWLPLGTVGPLLICAHYNPACSEFWKIPAELLVPVLIPKAKYDTLRRDVFDRVATSPLENTHRIRFSEPLQPDQGYSEVLGWMLREFPLDDVEVRAKLEQERRSLAEGAHHDYSALKGLPRHYACTVHHLATGEPCFNPEYAPSQTMFSENILEKHAVYPMYCGSKVVYLLSAEKNNFAFEDEWLSSGNEAIDFRTIYADRDTIMAIIAKERGRVAASGAVEVSGDLTYSDVANIVEIDLQEVQRINPSSINVTSEQVVHWVLYRAITGRASDLHIEKYFNTARFRARIDGEMKVIHSCPEEMLARFISLIKNYANMGQRRQDAQDARFSLILGKKRVDCRVSAIPCRKDLQKITIRFLDKDGGLKKLTELKLSPRQTKLLTDAMGRDQGLILITGPTGSGKTTTLYALLNSINSENINIHTVEDPIEYEIEGMNQTQTDPIHNLDFAEGLRRLMRADPDVILIGECRDNETAMAAINAALTGHLVLTTLHANDCLRAVSRLISMGVPAYLLADSLALTQAQRLVRRLCTFCKRPTPITPEIQAIFDANMVPIKPEVTSIYSKNGCPECNESGYSGRLALMELVAIDHALGDLISRNAPQSQMRRLAFRQGMLTLYQEGLVQVLNGNTSLEEISCLSYTSITAENHDDDPPDGKIVGMPVRRTPAVENEVLESKFEA*