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berkeley_reactor_200306_planktonic_scaffold_333344_94

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(98491..99483)

Top 3 Functional Annotations

Value Algorithm Source
glycerate dehydrogenase n=1 Tax=Paenibacillus elgii RepID=UPI000248DA17 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 326.0
  • Bit_score: 353
  • Evalue 1.90e-94
Glycerate dehydrogenase {ECO:0000313|EMBL:KEQ25751.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 327.0
  • Bit_score: 349
  • Evalue 5.20e-93
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 326.0
  • Bit_score: 332
  • Evalue 1.30e-88

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Taxonomy

Paenibacillus sp. MSt1 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 993
ATGCCCAAGATCGTCGTCCTCGATGGCTACACTCTGAACCCGCTCCCCGCCACGGAAGCCTCACCGGACCACCCCTCGTGGGACGCATTGGCCGCCATCGGCGATCTCACCGTCTATGATCGCACCGCTCCCGCGCAAATCGCACTTCGGGCCGCCGACGCCGAAATCGTCCTGACAAACAAAGCCCCGCTTTCAGCGGAAACCATCGCCGCCCTCCCTTCCCTGAAATACATCGGGGTCATGGCAACCGGCACCAATATCGTCGACCTGAAGGCCGCCAGCGAGCATGGCATCGTCGTTACCAATGTCCCCGGCTATTCGACCATGTCCGTTGCCCAGCATGTCTTTGCCCTCATCCTTGAGCTGTGTTCCCAGGCTGGGCCGCTGGATCGCGAGGTCAAGGCAGGCCGCTGGCAGGCGTGCCCGGATTTTTGCTTCACCGTCGCTCCCCTGCGCGAACTCGATGGGAAAACCCTTGGCATCGTCGGCCTCGGAGCCATCGGTCAAGCCGTCGCCCGCATCGGCATCGCCTTCGGCATGAAGATCCTCGCCACCGCCAGATCCCCCAAGCAGGTCGACTTCCCGGTCGATTGGGTCTCAACCGAGGATTTGCTCCAGCGCTCGGACGTCGTAAGCCTGCACTGCCCGCTCACACCCGAGACGCATCATCTGATCAATGCCAAAACGCTCGCCGCGATGAAGCCCTCCGCCATCCTCATCAACACGGGACGCGGCCCGCTGGTCGAGGAGCAGGCGGTGGCGGCAGCCCTCGCTGCGGGGCACCTCGGCGGCTACGGCGGCGACGTGCTTCTCGCCGAGCCCCCCGTTCATGGCAGCCCGCTCATTTCCGCTCCGCGCTCCGTCATCACCCCCCATGTGGCATGGGCGACCGTCGAGGCCCGCCAGCGCCTGATGGATGCCGTGGTCGGCAACGTGCAGGACTTCCTTTCGGGAACTCCCTCTCACGTGGTCAATTCCCCGGTACGCTCTTGA
PROTEIN sequence
Length: 331
MPKIVVLDGYTLNPLPATEASPDHPSWDALAAIGDLTVYDRTAPAQIALRAADAEIVLTNKAPLSAETIAALPSLKYIGVMATGTNIVDLKAASEHGIVVTNVPGYSTMSVAQHVFALILELCSQAGPLDREVKAGRWQACPDFCFTVAPLRELDGKTLGIVGLGAIGQAVARIGIAFGMKILATARSPKQVDFPVDWVSTEDLLQRSDVVSLHCPLTPETHHLINAKTLAAMKPSAILINTGRGPLVEEQAVAAALAAGHLGGYGGDVLLAEPPVHGSPLISAPRSVITPHVAWATVEARQRLMDAVVGNVQDFLSGTPSHVVNSPVRS*