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berkeley_reactor_200306_planktonic_scaffold_333344_116

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 119052..120071

Top 3 Functional Annotations

Value Algorithm Source
Methanol dehydrogenase regulator n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AW87_SYNWW similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 311.0
  • Bit_score: 365
  • Evalue 3.90e-98
methanol dehydrogenase regulator similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 311.0
  • Bit_score: 365
  • Evalue 1.10e-98
Methanol dehydrogenase regulator {ECO:0000313|EMBL:ABI69017.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 311.0
  • Bit_score: 365
  • Evalue 5.50e-98

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Taxonomy

Syntrophomonas wolfei → Syntrophomonas → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGATCGAAGAGCCCAAAGTGTCCCCCGAGGAGCAGATCGCCCTGCTCCAGCATCGTTTCGCCACCATGCAAAGCGCCATTCAAAAGGCCGTGGTGGGGCAGGACGAAATCGTTCGTTATACGCTGATGGCCGTCGTGGCCGGAGGCCATGTGTTGCTGGAAGGCGTGCCGGGACTAGGCAAGACGCTGCTCGTCAAGACGATCGCCTCCGCGCTGCACCTGAAGTTTCAGCGTGTGCAGTTCACGCCGGACCTGATGCCGTCGGATCTCCTCGGCACCACGCTGCTCGTCGATGACGGGAGGGGACATCATCAGTTCCGCTTTGAGGCCGGTCCGATCTTCTCCAACGTCCTCCTGGGCGATGAGATCAACCGCGCCACGCCCAAGACCCAGTCTGCCCTGCTCGAGGCCATGCAGGAGGGGCATGTCACGGTGGGGGGCGAAACGAGACACCTTCCTCAGCCCTTCTTCGTTCTTGCGACACAGAATCCCCTGGAGATGGAGGGAACGTACCCGCTGCCCGAGGCGCAGATGGACCGGTTCTTTTTCCAACTCATCGTGCCATATCCGGCGGAGGAGGAGTTTGCCCGCATCCTGGAGCTGACCACATCCGGCGTGAAAGAGACGGTGACTCCGGTTCTCTCCGGGCAGGAACTCCTCGAGATGCGTGCAGTGGCGGCCTCCGTACCCGCTACGGCCACCATGCGCCAGCGAGCTGTGCGTCTGGTCATGGCCACACACCCGGAGTCGCCCTACGCGACCGCCGAGGTGAAGCGCTATGTCCGCTACGGCGCCAGCCCGCGTGCCGGTCAGGCATGTATTGCCGCAGCCAAGATAGCGGCGGCACTGGCGGGACGCTTCCATGTCGCATCCGAGGATCTCATCTCGGTGGCGCACCCGATCCTGCGGCATCGCATGATGTTGAACTTTGAGGCGCAGGCCGATGGACTCACGGCCGACCGCATCCTCGACGGTGTGGTGAGCGAATGTCGTGCCGCCTGGGCACGCGAGGCGAGCTAG
PROTEIN sequence
Length: 340
MIEEPKVSPEEQIALLQHRFATMQSAIQKAVVGQDEIVRYTLMAVVAGGHVLLEGVPGLGKTLLVKTIASALHLKFQRVQFTPDLMPSDLLGTTLLVDDGRGHHQFRFEAGPIFSNVLLGDEINRATPKTQSALLEAMQEGHVTVGGETRHLPQPFFVLATQNPLEMEGTYPLPEAQMDRFFFQLIVPYPAEEEFARILELTTSGVKETVTPVLSGQELLEMRAVAASVPATATMRQRAVRLVMATHPESPYATAEVKRYVRYGASPRAGQACIAAAKIAAALAGRFHVASEDLISVAHPILRHRMMLNFEAQADGLTADRILDGVVSECRAAWAREAS*