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berkeley_reactor_200306_planktonic_scaffold_333344_289

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 322319..324073

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, transmembrane region, type 1 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPD1_ROSS1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 588.0
  • Bit_score: 461
  • Evalue 6.90e-127
ABC transporter transmembrane region, type 1 similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 588.0
  • Bit_score: 461
  • Evalue 1.90e-127
ABC transporter, transmembrane region, type 1 {ECO:0000313|EMBL:ABQ88484.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 588.0
  • Bit_score: 461
  • Evalue 9.70e-127

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Taxonomy

Roseiflexus sp. RS-1 → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1755
ATGAATCATCGACAAACTGTCTTCCGGCTCTGGAAGGTACTACGCCCTTTGCGTGTGACCCTGACGCTCTCTGTTGGCATGCGTATCGTGAACCATGTGCTGGCCATTATTCTTATCGTGCTGGCCGTATTGGGGATCTCCGCTATCGCCCGGGGAGGTGGTAGCAGGGAACTTTGGAGTGTGGCCCTGGCGTTGGTCGGGCTGGGCATGGTCAAAGGCGTATTTCGCTATCTGGAGCAGTTTTCGGGGCATTACGTTGCTTTTCGCCTGCTGGCCGACCTGCGGCGTCAGCTGTACGACTCGCTTGAGGCTCTCGCTCCGGCGGGATTGGGGAGCGAGCGGAGCGGCGACCTGGTCTCACGAGCCATTGCCGACGTGGAGAGGGTCGAGGTATTCTATGCTCATACCATTGCTCCTGCGATAGTTGCCATGGTCATTCCATTCGCTGTGCTTGGAGCTTTGGCGGTCGTCAGTCCGGCATCAGCGTTGGTTTTGCTGCCCATCGTTCTCCTGGTTGGCGTGGTTATCCCATTTGCAGCTCATCAGCTTGGTATGCATGCGGCTCAGAGAACGAGAAATGGCCTCGGAGAGATCGCCGTGCGACTGGCGGATACCATTCAGGGGATCAGGGAGACACTGGTCTTCGGCTATGGGGATCGTGGGGAAGCTCTTCTCGAGCGCGCAGGCGATGAGGTGGGAGACGCACAAAAGGGGCTGGCCCGTTGTTCGGCATTCCAGAGCATGGCGACCGAGCTGGCTATCGGGGCAGGTGTGCTGGCCGTGATGATCTTGGGAAGCCGGGAAGTTTTGTCGGGAACGATGCCTGTAAAGGAATTTCCCCTTGTTCTCGCTCTGACATTGAGTGTGTTCGTGCCATTGTTAGGTATAACAAATCTGATTCCCGATTTTGAGCAGGCGATCAGCAGTGCCCGTAGACTCTTCGCGATAATTGATCGTCCAGAGAGCGATCTCTCATCTCGGTACTTCGGGGGCGGCCGTCCCAAGGATTCGGGAATCGTTTTTGACCGGGTGGCATTTTCCTATGAACCTGACGGAGCACCGGCGCTGGATCGCGTTTCGTTTACCATGAAGCCAGGGGAGATCACTGCCATTGTCGGGGCGAGTGGAGCAGGGAAATCAACATTGGTTAACCTGCTTTTGCGCTATTGGCAGGAGCGGCGAGGGGATATCCGGCTCGGAGGCATTTCCCTCCGGACCCTGGCGCCGGAGAGACTGCGGGACCTGATCGCTGTGGTTCCGCAGCGGGTGCATGTTTTTAACATGACTCTCCGGGAGAATATCCGCCTCGCCCGGCCCGAGGCAACCGATGAGCAGATCGAGACGGCAGCTCGTCTCGCCCGGATTCATGACTTTATCATGGAGCAACCAGAGGGATATGACACCCAGGCTCACGAGGGCGGTTCACGGCTTTCGGGTGGGCAACGGCAGCGAATCGCCATCGCACGAGCCTTCCTGCGTGATGCTCGGGTATTGGTTTTCGATGAAGCTACCGCCCACCTTGATGAACGAACGGAGCGCGACATCATGGACTCTGCCCGTTCGTGGCAGGCGATGGCGCCGGGCCGCACAGTCATGGTCATCGCGCATCGGCTGGCTTGTGTACAGGACGCCTCGCGAATCGTCGTGCTCGAGCGCGGGCAGGTTGCCGGCTTCGGCAGACATGACGAGCTGCTGGAAAGTTGCGAGGTTTACGCGGATCTCTTTGCGGCGCAGTCCTCCGGCGCGCTGGTCTAG
PROTEIN sequence
Length: 585
MNHRQTVFRLWKVLRPLRVTLTLSVGMRIVNHVLAIILIVLAVLGISAIARGGGSRELWSVALALVGLGMVKGVFRYLEQFSGHYVAFRLLADLRRQLYDSLEALAPAGLGSERSGDLVSRAIADVERVEVFYAHTIAPAIVAMVIPFAVLGALAVVSPASALVLLPIVLLVGVVIPFAAHQLGMHAAQRTRNGLGEIAVRLADTIQGIRETLVFGYGDRGEALLERAGDEVGDAQKGLARCSAFQSMATELAIGAGVLAVMILGSREVLSGTMPVKEFPLVLALTLSVFVPLLGITNLIPDFEQAISSARRLFAIIDRPESDLSSRYFGGGRPKDSGIVFDRVAFSYEPDGAPALDRVSFTMKPGEITAIVGASGAGKSTLVNLLLRYWQERRGDIRLGGISLRTLAPERLRDLIAVVPQRVHVFNMTLRENIRLARPEATDEQIETAARLARIHDFIMEQPEGYDTQAHEGGSRLSGGQRQRIAIARAFLRDARVLVFDEATAHLDERTERDIMDSARSWQAMAPGRTVMVIAHRLACVQDASRIVVLERGQVAGFGRHDELLESCEVYADLFAAQSSGALV*