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berkeley_reactor_200306_planktonic_scaffold_333344_290

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(324070..324996)

Top 3 Functional Annotations

Value Algorithm Source
RarD protein, DMT superfamily transporter n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VUK4_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 299.0
  • Bit_score: 318
  • Evalue 3.80e-84
RarD protein, DMT superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 299.0
  • Bit_score: 318
  • Evalue 1.10e-84
RarD protein, DMT superfamily transporter {ECO:0000313|EMBL:AFZ11621.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 299.0
  • Bit_score: 318
  • Evalue 5.30e-84

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Taxonomy

Crinalium epipsammum → Crinalium → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 927
GTGCAGAATCCGCTGCCTGCTGTGAATACGGAAGCCAAGAGTCGCCAGGGAGTGATCTACGCATTGCTGGCGTATGGTTCATGGGGACTTTTCCCGCTGTATTGGAAGCAGTTTGGTTCGGTGCCAGCCGCCGAGGTCATCTGCCACCGACTGCTATGGTCGTTGGTTTTCCTGGTGATTCTGGCCGCAGCTTGGAGACAGCTTGCGCCGTGTCTGCGTGTGATTCGCTCACCCCGACTGGTGGGCCTTCTTTTCCTCACGGCAGCCCTGCTGAGTTTCAATTGGGGACTCTTCGTCTACGGAGTGAATACCGGGCAGGTGGTGGAAACTAGCCTTGGCTATTTTATCAATCCCCTTGTCAACGTACTGCTAGGCGCCGTGGTACTGCGGGAGCGCCTCACCCGTGCCCAGATCATCGCCGTGCTCCTCGCCACGTTGGGAGTCATCTATTTTGGCTGGCACCTCTGGAAAGTACCATGGATCGCTCTGGGTATCGCCTCAAGCTTCGGTATCTATGGATTGCTCCGCAAGATGGTGCCGATCGATCCCCTGCCCGGCCTGCTGGTGGAGACGGCTGTCATGGCACCCGTCGCACTGATCCTGTTGGGAATATTTGCCGGGCATGGTTCGATGCATTTTCTAGACACTCCAAAGATCACTCTGCTCCTGATGGGTGGAGGCATCGTGACAGCCTTCCCCCTCATCTGGTTCATCTCTGCGGCCAAGCTGCTCCCACTGTCGACTCTGGGGTTCTTCCAGTACCTCGCACCGACGTTGCAGCTACTCGTCGGGGTCTTCGTATTTCACGAACGATTCACCCTGCGCGATGGCATTGCCTTCGCCTTCATCTGGACGGCTATCGCGATCTTCATGGCATCCTCCCGATTCCGCGCCCGGAAGGAACCCGTAATCGAGCCTGCCGCCTAG
PROTEIN sequence
Length: 309
VQNPLPAVNTEAKSRQGVIYALLAYGSWGLFPLYWKQFGSVPAAEVICHRLLWSLVFLVILAAAWRQLAPCLRVIRSPRLVGLLFLTAALLSFNWGLFVYGVNTGQVVETSLGYFINPLVNVLLGAVVLRERLTRAQIIAVLLATLGVIYFGWHLWKVPWIALGIASSFGIYGLLRKMVPIDPLPGLLVETAVMAPVALILLGIFAGHGSMHFLDTPKITLLLMGGGIVTAFPLIWFISAAKLLPLSTLGFFQYLAPTLQLLVGVFVFHERFTLRDGIAFAFIWTAIAIFMASSRFRARKEPVIEPAA*