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berkeley_reactor_200306_planktonic_scaffold_333344_308

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(341769..342056)

Top 3 Functional Annotations

Value Algorithm Source
gatC; glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.6 6.3.5.7) similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 96.0
  • Bit_score: 95
  • Evalue 4.60e-18
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IX78_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 96.0
  • Bit_score: 95
  • Evalue 1.60e-17
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 96.0
  • Bit_score: 101
  • Evalue 4.10e-19

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 288
ATGAGCTCACCCGATCTGAACGTGCGCAAAGTCGCCACCCTGGCCCGCCTCGCGCTCTCCGATGAGGAGGTCGCCACATTCCAAGACCAGCTTGGTCGCATCCTTGAGCATATCGAGCATCTGAAAAAGCTGGATGTCTCCGACGTGGAGCCGACAGCCCACACGTATCCGGTCTTTAATGTCACCCGCGACGACGTACCGGGTGAAAGCCTGCCGCGCGAAGCCTTCCTCGGCATCGCCCCGCGCTCCGCAAACAATCTCCTGATCGTCCCGAAGGTTCTCGAATAA
PROTEIN sequence
Length: 96
MSSPDLNVRKVATLARLALSDEEVATFQDQLGRILEHIEHLKKLDVSDVEPTAHTYPVFNVTRDDVPGESLPREAFLGIAPRSANNLLIVPKVLE*