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berkeley_reactor_200306_planktonic_scaffold_333344_315

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 348182..349066

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035D5BAF similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 277.0
  • Bit_score: 408
  • Evalue 3.50e-111
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 277.0
  • Bit_score: 408
  • Evalue 9.90e-112
ABC transporter related {ECO:0000313|EMBL:ACL74152.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 277.0
  • Bit_score: 408
  • Evalue 4.90e-111

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCAAACGCTTAACCTGCCCAGCCACCTGGACCAGAGCCCGGAGGTCGCCGCGCGATTCTCGAAGCTCAAGAGCCGCCCGGTCATTCTCGACGTCAAACATCTCAACAAGACGTTCCATACCCACACGACGCTCAACGACATTTCGCTCCAGGTTTTCCGCCGCGAGTTCATGTGCGTGGTCGGCCCGTCTGGTTGTGGTAAGTCCACGCTCATTCGCATCATCGCGGGGCTGGAGACACCGACATCCGGCGACGTGCTGCTGGAGGGAACTCAGGTTTCCGCGCCGGGCTCGGATCGCGGTATGGTCTTTCAAGGATACACGCTCTTTCCGTGGCTGACTGTGAAAAAGAACGTCATGTTCGGCCTGGAAATCGGCGGGCGTTCCTCCACCGAGTCGGAGAGCGAAGCCCGGCAATGGATCGATCTCGTCGGCCTGGGCAAATTTGAAAACTCCTATCCGCACGAGCTCTCCGGCGGCATGAAGCAACGCGTCGCCATCGCCCGCGCCCTCGCCAACAACCCGCGTATTCTGCTCATGGACGAGCCCTTCGGCGCCCTCGATGCCCAGACGCGCTGCAAGATGCAGAGCTACCTGCTGGAGATCTGGAAGCGTGTCGACGTCACGATCATGTTTGTGACGCACGATCTGGATGAGGCCATCTACCTCTCCGACCGCATCCTGGTGCTGGGCACCAACCCGAGCCGCATCATGGAGGTCATCGAGGTTCCCGTTCCGCGACCGCGCAGTTCCAGCCAGTTCCTTTCACCCGAGTTTCTGGCTACCAAGGCCCGCCTGGAGGAGCTGATCCACGGTCCGGACGAGGCAGAGGCCATGCCTTTGCCAAAGATCCGGCTTACTCATGCGGGTGACGATGTGGAGTAG
PROTEIN sequence
Length: 295
MQTLNLPSHLDQSPEVAARFSKLKSRPVILDVKHLNKTFHTHTTLNDISLQVFRREFMCVVGPSGCGKSTLIRIIAGLETPTSGDVLLEGTQVSAPGSDRGMVFQGYTLFPWLTVKKNVMFGLEIGGRSSTESESEARQWIDLVGLGKFENSYPHELSGGMKQRVAIARALANNPRILLMDEPFGALDAQTRCKMQSYLLEIWKRVDVTIMFVTHDLDEAIYLSDRILVLGTNPSRIMEVIEVPVPRPRSSSQFLSPEFLATKARLEELIHGPDEAEAMPLPKIRLTHAGDDVE*