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berkeley_reactor_200306_planktonic_scaffold_333344_317

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(349704..350915)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 391.0
  • Bit_score: 615
  • Evalue 3.60e-173
tryptophan synthase subunit alpha n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746830 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 398.0
  • Bit_score: 634
  • Evalue 7.00e-179
tryptophan synthase subunit beta similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 399.0
  • Bit_score: 565
  • Evalue 6.60e-159

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1212
ATGTCCTCTCCTTCACCTGTCTACGCGCCCGATGCCACCGGTCACTTCGGCCAGTACGGGGGTAAATTCGTCCCGGAGACGCTCTATAGTGCGCTCGAGGAGCTCGAAGAGGAGTACCTGAAGGCCAAGGACGATCCGGCCTTTCAGCAGGAGTACATGAATCTCCTGACCGACTACTGCGGTCGCGAAACCCCGCTCTACTACGCCGAGCGCCTGACCCAGCACCTCGGCGGGGCCAAGATTTACCTCAAGCGGGAGGACCTCCTGCACACCGGCGCGCACAAGATCAACAACGCCATCGGCCAGGCCATCCTCGCCCGCCGCATGGGCAAAAAGCGCGTCATCGCCGAGACCGGCGCGGGCCAGCATGGCGTGGCCACGGCTACCGTGGCAGCGCGGTTTGGCTTTGAGTGCGTGATTTACATGGGCGCGGTGGACATGAAGCGCCAGGCACTGAACGTGGCCCGCATGGAATTCCTCGGCGCAAAAGTCGTTCCCGTAACCGCCGGGCAGGCCACGCTGAAGGAAGCGGTCAACGAGGCGATGCGCGACTGGGTGACGAATGTTCGCTCGACCCACTACATTCTGGGCACCGCCTATGGCGCCCACCCCTACCCTGTGATGGTACGTGATTTCCATCGCATCATCGGCGATGAAGCGCGGCGGCAGATTCTGGAGAAAGAGAATCGCCTTCCCGACCTGCTCATTGCGTGCGTGGGCGGCGGCAGCAATGCCATTGGACTATTTTACCCCTTCCTCGAAGACTCTTCCGTGCGCCTCGTGGGCGTGGAGGCCGGCGGGGAAGGCATCATCAAGGGCCGACATGCGGCGCGCTTCCAGGGCGGACGCCTCGGCGTGCTCCAGGGCGCGAAGACATGGCTGCTCGCCGACGAGGACGGACAGATCGAATTGACTCACTCCATCTCGGCGGGTCTCGACTACGCAGCGGTAGGGCCGGAGCATTGCTACCTGCGCGAGATCGGCCGGGCGGAATACGACTACGCCACGGACGATGAGGCGCTGGCGGCTTTCCGTACGCTGGCCTCGGTGGAGGGAATCATTCCCGCGCTGGAGTCATCGCACGCGGTGGCTCATGCCATCAAGGTCGCGCCAAAGATGAGCCCCGACCAGCTCGTGATCGTCAATCTCTCCGGCCGAGGAGACAAGGACGTCTCCCAGGCGGCGGAGATTTTACTGAAGAAGAGCGTGTAA
PROTEIN sequence
Length: 404
MSSPSPVYAPDATGHFGQYGGKFVPETLYSALEELEEEYLKAKDDPAFQQEYMNLLTDYCGRETPLYYAERLTQHLGGAKIYLKREDLLHTGAHKINNAIGQAILARRMGKKRVIAETGAGQHGVATATVAARFGFECVIYMGAVDMKRQALNVARMEFLGAKVVPVTAGQATLKEAVNEAMRDWVTNVRSTHYILGTAYGAHPYPVMVRDFHRIIGDEARRQILEKENRLPDLLIACVGGGSNAIGLFYPFLEDSSVRLVGVEAGGEGIIKGRHAARFQGGRLGVLQGAKTWLLADEDGQIELTHSISAGLDYAAVGPEHCYLREIGRAEYDYATDDEALAAFRTLASVEGIIPALESSHAVAHAIKVAPKMSPDQLVIVNLSGRGDKDVSQAAEILLKKSV*