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berkeley_reactor_200306_planktonic_scaffold_333344_319

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 351889..352836

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 309.0
  • Bit_score: 406
  • Evalue 2.60e-110
Ribonuclease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D776_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 309.0
  • Bit_score: 406
  • Evalue 1.90e-110
ribonuclease HIII similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 295.0
  • Bit_score: 277
  • Evalue 3.70e-72

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 948
GTGCTCCGGGTATTACTGGGTGTTCCTGTGTCCGAAAAAGCCATCACTCTCTACAATACGCCGCTCACCTCCGAGCAAGCTGCGAAACTCAAGCTGCTGCTCCAGGCGGACGGTTACAAGTTCGAGACGCGTCCCTACACGCTTTTCTTTGCCCAGAAGGACAAATTGACCATCGCGGTGTATGAAAAAGGACCGAAGGTGGTCGTTCAAGGCCGTGGCACGGAGGAGTTTGTCCAGTACCGGTTGGAGCCTGAGATTCTCGGCGAGGCCAAGCTCGGCTACGACGAGGTGCTCAAGCCCGAGATGTTTGAGCCGCATTTCGGCATCGACGAAAGTGGCAAGGGCGACCTCTTTGGCCCGCTCGTCATCGCCGGGGCTTATGTCGACCGCGACATCGCCCAGCAGTTCAAGAAGCTCGGCATCACCGACAGCAAGCGCATCAGCTCGGACAAGAAAATCCGCGACCTTGCCGAGGCTATCCGAGCTTCCCGCACCCCGCAGAGCGTCGTGACCATCAGCCCCGAGCGGTACAATGAGCTCTATAAAAAGATCGGCAACCTGAACCGCCTCCTCGCTTGGGGTCACGCCCGCGTCATTGAGAATCTCTGCGAGTTGAAACCCGACTGCCCACGCGCCCTGTCGGATAAATTTGCCGACGTTCGCGTCCTTCAGCGCGCTCTCATGGAGAAGGGGCGCGCCATCACTCTGGACCAGCAAACCAAGGCGGAATCCGACTACGCCGTTGCCGCCGCCTCGATCCTGGCTCGCGAGAAGTTCATTAACTGGCTCGACGACCACGGCAAAGAGGCCGGAGTGCCCCTCTTGCGGGGTGTCTCCAAGGCGGTCAAGGCCGCCGGACGCCAGATCGCCCAGCAGGGTGGAAGTGAGGCGCTCGCCAGGTTCGCCAAGATGCATTTCAAGACCGCACAAGAGGTTCTCACCGATTAA
PROTEIN sequence
Length: 316
VLRVLLGVPVSEKAITLYNTPLTSEQAAKLKLLLQADGYKFETRPYTLFFAQKDKLTIAVYEKGPKVVVQGRGTEEFVQYRLEPEILGEAKLGYDEVLKPEMFEPHFGIDESGKGDLFGPLVIAGAYVDRDIAQQFKKLGITDSKRISSDKKIRDLAEAIRASRTPQSVVTISPERYNELYKKIGNLNRLLAWGHARVIENLCELKPDCPRALSDKFADVRVLQRALMEKGRAITLDQQTKAESDYAVAAASILAREKFINWLDDHGKEAGVPLLRGVSKAVKAAGRQIAQQGGSEALARFAKMHFKTAQEVLTD*