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berkeley_reactor_200306_planktonic_scaffold_333344_332

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 370291..370920

Top 3 Functional Annotations

Value Algorithm Source
endopeptidase Clp (EC:3.4.21.92) similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 197.0
  • Bit_score: 310
  • Evalue 2.60e-82
Clp protease proteolytic subunit ClpP n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745C29 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 197.0
  • Bit_score: 324
  • Evalue 4.70e-86
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 204.0
  • Bit_score: 342
  • Evalue 2.30e-91

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 630
ATGACGAACTCCTATCTGATTCCCACGGTCATCGAACAGACCGGTCGTGGCGAGCGCGCTTACGACATCTACTCCCGACTCCTCAAGGATCGCATCATCTTCATCGGCACGCCGATCGACGATCATGTGGCCAATATCGTGATCGCGCAGATGCTCTTCCTTCAGATGGAGGACGCCAAGAAAGACATCAGCATTTACATCAACTCCCCTGGCGGATCCGTCACGGCGGGTCTCGCGATCTACGACACGATGCAATTCGTGACGTGTGACGTGAATACCTACTGCATGGGCATCGCCGCCAGCATGGGAGCTGTCCTGCTTTGCGCCGGCACCAAGGGCAAGCGTTACGCGCTGCCCAACTCGGACATCATGATTCACCAGGTCTCGGGCGGCGCCCAGGGCCAGGCCAGCGATGTCGAGCGCCAGGTCGAGTTCATGTTCAAGCTCAAGAAGCGCCTCAACGGCATCCTCTCGCTTCACACCGGCAAGTCGGTGGAGCAGGTGGAGAGGGACGCCGACCGTGACAACTATATGACCGCCGAGGAGGCGTGTGCTTATGGTCTGGTCGACGAGGTCGTCAAGTCCCGCAAGGAAATCAAAGAGCTTCCCGTCGAAAAGGCTTCCGAGTAG
PROTEIN sequence
Length: 210
MTNSYLIPTVIEQTGRGERAYDIYSRLLKDRIIFIGTPIDDHVANIVIAQMLFLQMEDAKKDISIYINSPGGSVTAGLAIYDTMQFVTCDVNTYCMGIAASMGAVLLCAGTKGKRYALPNSDIMIHQVSGGAQGQASDVERQVEFMFKLKKRLNGILSLHTGKSVEQVERDADRDNYMTAEEACAYGLVDEVVKSRKEIKELPVEKASE*