ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_333344_348

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 388668..390362

Top 3 Functional Annotations

Value Algorithm Source
ABC-type Fe3+ transport system, permease component n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZN5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 550.0
  • Bit_score: 701
  • Evalue 6.50e-199
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 564.0
  • Bit_score: 701
  • Evalue 1.10e-199
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 564.0
  • Bit_score: 710
  • Evalue 1.20e-201

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1695
ATGAGCCGCGCCACCGCCATCGCCGTTTTCGGATTCAGCGTTCTGTTTTTCTTCTTCTTTTTCCTCTGGCCCATCGGTGAGACGGTCCGGGGGGCGTTTGCCACGCCAGGGCAGGGGTTCACCCTGGACTATATCTTCGAAGTCTTTCGCAATCCGGTGTATGTGGAGGGATTGGTCAATGCGTTGATCCTGGCGGTCGCCAGCACGGCGCTGACTTTGATGATTGCGCTACCGCTTGCCCTCGTCTCAGATCGCTTCCTCTTTCCGGGGAGGACTCTGCTCTCTGCACTCGTGCTCGTACCGATGATCCTGCCTCCCTTTGTGGGAGCGATCGGCGTGCGGCAGATCCTCGGTCAGCAGGGCGCGTTGAACGCCTTGCTGGAAAGCCTGGGGCTTGTCAACGAAGCCGCGCCGGTTGACTGGCTGGGGCAGGGGAGATTCTGGGGTGTTGTCATCATGAATGCCCTGCATCTTTACCCGGTGCTGTTTCTCAACATCACGGCGGCCCTTTCCAATGTCGATCCCGCCATGGAGGAGGCGGCGGAGAATCTCGGGTGCACGGGAGTGAGGAAGTTCCGGCGCATCACGCTCCCTCTCATCATGCCGGGAGTCTTTGCCGGCGGAGCCATCGTGTTTATCTGGGCGTTTACCGAACTCGGCGTGCCTTTGATGTTTGAGTACACGAGGGTAACTCCGGTGCAGATTTTTTACGGTATTCGCGACATCTCGGGGAATCCGTTTCCCTATGCTCTGGTGGTCGTGATGCTGGCATCCACCGTGCTATTGTATGCGGCGAGTCGCTACGTTCTCGGCAATAGTGCCCATGGGATGATGCCCAAGGCCACAAGCCAGGGCGGCCCCCGACCGGTGGGGAAGGTGGCTGCTTGGGGATGCACCGCACTCTTTGGCGGGGTCACTGCACTGGCGCTGCTGCCACACATCGGCGTGATCCTGGCCGCCTTCTCGTCCAACTGGTACGGTACCATTCTGCCCGCAAGCTGGACGCTGGAGCACTTTGAGGGTGCCTTGGGCCACAGCCTGACGCTTCTTTCGATCCAGAATAGCCTGAAATACGCTTCGCTGGCCACGATCCTCGACGTCGTGCTCGGGATCGGAATCGCCTACGTTGTGACCCGGACTAAGCTGCATGGTCGCGGTCTTCTCGATGCCATGGCGATGCTTCCGCTGGCGGTTCCCGGGCTGGTGCTGGCATTTGGATATCTCGCGATGACCCAGCCGGGAAAGGCCTTTGAGTTTCTCAATCCGCTCGTCGATCCTCTGGCCATTATCGTCATCGCCTATGCCGTCCGGCGTCTGCCCTACGTCGTCCGCTCCGTGGCGGCGGGGTTGCAGCAAACCAGCGTAACCCTGGAGGAGGCTGCGCAGAATCTCGGAGCCTCGCCGCTCCGCGCTTTGCGCCGAGTGACGTTGCCGCTTATCCTCGCCAATGTCCTCGCCGGCGGGCTGCTCGCATTCTCCTTTGCAATGCTGGAGGTAAGCGATTCGCTGATCCTGGCCCAGCGGATGAAGGATTATCCGATCACCAAGGCCATTTTCGAGCTATACCAACTCCTTGGGGAAGGCCCGTATCTGGCTTGCGCCCTCGGCGTCTGGGCAATGCTGTTCCTCGCCGCCACTGTATTTGCGGCAAATCTTCTCCTCGGAAAGAAGTTGGGAGGCATGTTCCGGCTCTAG
PROTEIN sequence
Length: 565
MSRATAIAVFGFSVLFFFFFFLWPIGETVRGAFATPGQGFTLDYIFEVFRNPVYVEGLVNALILAVASTALTLMIALPLALVSDRFLFPGRTLLSALVLVPMILPPFVGAIGVRQILGQQGALNALLESLGLVNEAAPVDWLGQGRFWGVVIMNALHLYPVLFLNITAALSNVDPAMEEAAENLGCTGVRKFRRITLPLIMPGVFAGGAIVFIWAFTELGVPLMFEYTRVTPVQIFYGIRDISGNPFPYALVVVMLASTVLLYAASRYVLGNSAHGMMPKATSQGGPRPVGKVAAWGCTALFGGVTALALLPHIGVILAAFSSNWYGTILPASWTLEHFEGALGHSLTLLSIQNSLKYASLATILDVVLGIGIAYVVTRTKLHGRGLLDAMAMLPLAVPGLVLAFGYLAMTQPGKAFEFLNPLVDPLAIIVIAYAVRRLPYVVRSVAAGLQQTSVTLEEAAQNLGASPLRALRRVTLPLILANVLAGGLLAFSFAMLEVSDSLILAQRMKDYPITKAIFELYQLLGEGPYLACALGVWAMLFLAATVFAANLLLGKKLGGMFRL*