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berkeley_reactor_200306_planktonic_scaffold_333344_369

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(416939..418486)

Top 3 Functional Annotations

Value Algorithm Source
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 491.0
  • Bit_score: 595
  • Evalue 6.40e-167
Probable malate:quinone oxidoreductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGD7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 491.0
  • Bit_score: 595
  • Evalue 4.60e-167
malate:quinone oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 491.0
  • Bit_score: 595
  • Evalue 1.30e-167

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1548
ATGCTAAGCGGGAAGGGAGAAGGGGCCGCCGACGTCATACTCGTCGGGGCGGGTATCATGAGCAGCACTCTGGGGGTCATCCTCAATGCGTTGGAACCAGATTGGAAAATTTTGATCCTGGAGTCGCTCGACGACGTTTCCCAGGAAAGCAGCCTCGCCTGGAACAATGCAGGAACAGGGCATGCCGCCCTCTGCGAACTGAACTACACGCCCGAGCAGGCCGACGGATCAGTCGATGTCTCCAAGGCCTTGAAAATCAACGAAGCCTTCGAAATCTCGAAGCAGTGTTGGTCCACCCTCGCCCAGCGCGGTGTTATTGCCTCGCCCGAGAAATTCATCCACCGGGTGCCGCATCACAGCTTCGTCAGAGGAGAAGCCAATACCTCCTTTCTGCGCAGGCGCTTTGAGGCTCTGAAGAGCCACCACGCCTTTGAGGGCATGCAGTTTGCCGATACGGCGGAAGAGATCGCCGAGTGGCTACCGCTCATGATGGATGGGCGGGAAAAGACAGAGAAGCTGGCCGCGACGCGCATGGCCATCGGCTCCGATGTGAACTTTGGCGAGCTGTGCCGCCAGTTTATCGACTACCTGCGCAAGCAGGGAGCCGAGGTGCTGCTCCGCCACAAGGTCACCGGCGTCGACCGCGAGGCCTCCGGGTGGCGCATCATGGCGAAGAATCTCGCCGACGGCGGGAAACGCGAATTCCGCGCCCCCTTCGTTTTCCTCGGAGCAGGCGGTGGCGCCCTGCCCCTTCTGCAGAAATCCGGCATCCCGGAGTGCAAGGGCTACGGCGGATTCCCGGTCGGCGGTCAATGGCTGCGCTGCGATGACCCGGCCCTGGCCGAGCGTCATTTCGCCAAGGTCTACGGCAAGGCCGAAGTCGGCACGCCACCCATGTCGGTCCCCCACCTCGACACCCGCGTGATCGATGGCAAACGCGGCCTGCTTTTCGGCCCGTATGCCACTTTTTCGACGAAGTATCTCCGCCACGGCTCGATCCTCGATATGCCGCTCTCGTTCCGTCCGGACAACGTGATCCCCATGCTGGCCGCCGGAGCGCAAAATATCCCGCTCACCCAGTATCTCATCGGCCAGGTGCTCCAGTCGCCCCGACAGCGCTTCCAGGCCCTGCAATCCTTCATTCCCATGGCGAAATTTGAGGACTGGAAGCTCGTCGACGCCGGACAGCGCGTCCAGGTGATCAAAAAACACCCGAAACTCGGCGGGGTGTTGGAGTTTGGCACCGAGGTGGTCGCTGCCGGGGACGGCTCGCTGGCCGCCCTGCTGGGGGCATCGCCCGGAGCCTCGACCTCCATCTCGATCATGCTCGAGCTGCTGGCCAGGTGCTTCCCCCAGCAAATCTCCAGTGAGAAATGGGTCACCAGCCTTCAGGCACTCATCCCGTCCTATGGCGAGCACCTCCTGGAAAATCGTGCCCTCTTTGACCGCGTACGGAGCTGGACGTCGGAAATCCTCGGCCTGCGGGCTCCGCTGCCAGAAATCCGCGTACCAGCCACTGTTGGGGTCAGTTCGTCCCAGGTCAGTTGA
PROTEIN sequence
Length: 516
MLSGKGEGAADVILVGAGIMSSTLGVILNALEPDWKILILESLDDVSQESSLAWNNAGTGHAALCELNYTPEQADGSVDVSKALKINEAFEISKQCWSTLAQRGVIASPEKFIHRVPHHSFVRGEANTSFLRRRFEALKSHHAFEGMQFADTAEEIAEWLPLMMDGREKTEKLAATRMAIGSDVNFGELCRQFIDYLRKQGAEVLLRHKVTGVDREASGWRIMAKNLADGGKREFRAPFVFLGAGGGALPLLQKSGIPECKGYGGFPVGGQWLRCDDPALAERHFAKVYGKAEVGTPPMSVPHLDTRVIDGKRGLLFGPYATFSTKYLRHGSILDMPLSFRPDNVIPMLAAGAQNIPLTQYLIGQVLQSPRQRFQALQSFIPMAKFEDWKLVDAGQRVQVIKKHPKLGGVLEFGTEVVAAGDGSLAALLGASPGASTSISIMLELLARCFPQQISSEKWVTSLQALIPSYGEHLLENRALFDRVRSWTSEILGLRAPLPEIRVPATVGVSSSQVS*