name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_333344_358
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
404829..406280
|
porin n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745AA7 id=11897 bin=ACD17 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_359
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(406633..408405)
|
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCX4_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_360
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(408730..409038)
|
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5T5_9BACT
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:EDY18138.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
fruB; phosphotransferase system HPr-related protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_361
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(409038..410015)
|
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
HPr kinase/phosphorylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5T4_9BACT
hprK; Serine kinase of the HPr protein, regulates carbohydrate metabolism
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_362
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(410021..410800)
|
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5R6_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY18119.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
yhbG; ABC transporter ATPase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_363
unknown
|
Not on your lists |
comp(410800..411390)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_364
unknown
|
Not on your lists |
comp(411394..411915)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_365
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(411899..412720)
|
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5S1_9BACT
2-dehydro-3-deoxyphosphooctonate aldolase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_366
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(412761..414587)
|
ATP-dependent DNA helicase RecQ n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZ05_9BACT
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIQ00247.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
ATP-dependent DNA helicase RecQ
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_367
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(414741..415076)
|
Glutaredoxin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D391_9BACT
Glutaredoxin {ECO:0000313|EMBL:EDY19202.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glutaredoxin
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_368
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(415113..416801)
|
30S ribosomal protein S1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D371_9BACT
Ribosomal protein S1 {ECO:0000313|EMBL:EDY19182.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S1
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_369
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(416939..418486)
|
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Probable malate:quinone oxidoreductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGD7_CHIPD
malate:quinone oxidoreductase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_370
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(418565..421789)
|
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI0003793CC7
carbamoyl-phosphate synthase large subunit
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_371
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
421887..422159
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTT6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21974.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_372
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
422192..422986
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTT7_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_373
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
422986..423774
|
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTT8_9BACT
ABC transporter-like protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_374
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
423794..424660
|
Mammalian cell entry related domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTT9_9BACT
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EDY21977.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ttg2C; organic solvent ABC transporter periplasmic protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_375
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
424668..425351
|
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZCP6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD58822.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_376
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(425365..426678)
|
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glutamate--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ9_9BACT
glutamyl-tRNA synthetase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_377
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
426817..427269
|
GatB/YqeY domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D702_9BACT
GatB/YqeY domain protein {ECO:0000313|EMBL:EDY17653.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GatB/YqeY domain-containing protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_378
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
427266..427955
|
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D703_9BACT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_379
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
427952..429217
|
Peptidase M16 domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D704_9BACT
Peptidase M16 domain protein {ECO:0000313|EMBL:EDY17655.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PqqL; Zn-dependent peptidase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_380
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
429214..429873
|
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP8_9BACT
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EDY21490.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphatase/phosphohexomutase HAD superfamily
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_381
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
429922..430329
|
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AVS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP99116.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_382
unknown
|
Not on your lists |
comp(430357..430728)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_383
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(430728..432308)
|
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
Glucose-6-phosphate isomerase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUV7_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_384
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
432338..432790
|
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745115
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:ERT60090.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
conserved hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_385
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
432787..433374
|
Peptidase M22 glycoprotease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D451_9BACT
putative glycoprotease M22
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_trna_3
unknown
|
Not on your lists |
433421..433503
|
transferRNA Leu
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_386
unknown
|
Not on your lists |
comp(433707..434984)
|
This feature has no annotations |