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berkeley_reactor_200306_planktonic_scaffold_333344_384

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 432338..432790

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745115 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 128.0
  • Bit_score: 133
  • Evalue 1.10e-28
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:ERT60090.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 129.0
  • Bit_score: 125
  • Evalue 3.20e-26
conserved hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 131.0
  • Bit_score: 117
  • Evalue 3.00e-24

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Taxonomy

Megasphaera sp. BV3C16-1 → Megasphaera → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 453
ATGGCAAACCGAAAACTGTTACCAACCCGTCTTCTCTCGGAGGAAGGCGCGATCTGTCGTTCCGAGGCGGAAATGATTTCTCTCGGCCAGGAAGTCGGCCGTTTGCTGAGCCTCGGAGACGTCGTGAGTCTGGAAGGGCCCCTCGGAGCGGGAAAGACGCAGTTTTCCAAGGGCCTTGCGGCGGGGCTGGAAAGTCAGGCCGAGGTGTCGAGCCCGACCTTTGCCCTCGTGCATGAATACGACGGAGGGAGGGTGCCGGTGGCGCACTTTGACTTTTACCGGCTGGAGTCCGCCGACGAACTCCTGACGACCGGCTATGACGATAATGTCGCGGAAGGCGTGACGATCGTGGAGTGGGGAAATAAGTTCCCCGAGGTGCTCCCAGCTTCCGCCCTGCGTTTTATTTTTGAGGTCGTCGATCCGTCCATCCGTGTCGTGAGGCTGGTGTCATGA
PROTEIN sequence
Length: 151
MANRKLLPTRLLSEEGAICRSEAEMISLGQEVGRLLSLGDVVSLEGPLGAGKTQFSKGLAAGLESQAEVSSPTFALVHEYDGGRVPVAHFDFYRLESADELLTTGYDDNVAEGVTIVEWGNKFPEVLPASALRFIFEVVDPSIRVVRLVS*