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berkeley_reactor_200306_planktonic_scaffold_145241

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Displaying items 31-60 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_145241_31
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28387..28953)
DNA (567bp) protein (189aa)
LemA family protein n=2 Tax=Microbacterium RepID=H8E7L1_9MICO
LemA protein {ECO:0000313|EMBL:EPD85332.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_145241_32
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29073..30386)
DNA (1314bp) protein (438aa)
FAD-linked oxidoreductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA66_9MICO
FAD-linked oxidoreductase {ECO:0000313|EMBL:KIC60254.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
FAD-linked oxidoreductase
berkeley_reactor_200306_planktonic_scaffold_145241_33
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30383..31615)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7K9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07200.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
alanine racemase
berkeley_reactor_200306_planktonic_scaffold_145241_34
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31716..32612
DNA (897bp) protein (299aa)
Esterase/lipase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6H4_MICTS
esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:BAJ74122.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_145241_trna_2
unknown

Not on your lists

comp(32627..32699)
DNA (73bp)
transferRNA Leu
berkeley_reactor_200306_planktonic_scaffold_145241_35
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32784..34265)
DNA (1482bp) protein (494aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7K8_9MICO
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIC07199.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
NADH dehydrogenase, FAD-containing subunit
berkeley_reactor_200306_planktonic_scaffold_145241_36
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34285..35622)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA62_9MICO
Serine protease {ECO:0000313|EMBL:EXJ53039.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
subtilisin-like serine protease
berkeley_reactor_200306_planktonic_scaffold_145241_37
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35619..36137)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036ECCC9
Septum formation initiator family protein {ECO:0000313|EMBL:EXJ53038.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_145241_38
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36175..36708)
DNA (534bp) protein (178aa)
Septum formation initiator n=2 Tax=Microbacterium RepID=H8E7K5_9MICO
Septum formation initiator {ECO:0000313|EMBL:EIC07196.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
septum formation initiator
berkeley_reactor_200306_planktonic_scaffold_145241_39
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36773..38053)
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Enolase n=2 Tax=Microbacterium RepID=H8E7K4_9MICO
eno; enolase
berkeley_reactor_200306_planktonic_scaffold_145241_40
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38163..38831)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT86_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85322.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
O-methyltransferase
berkeley_reactor_200306_planktonic_scaffold_145241_41
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38863..39867)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA59_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60249.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_145241_42
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39864..40229)
DNA (366bp) protein (122aa)
Regulatory protein GntR HTH n=2 Tax=Microbacterium RepID=H8E7K1_9MICO
Regulatory protein GntR HTH {ECO:0000313|EMBL:EIC07192.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
GntR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_145241_43
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40297..41082)
DNA (786bp) protein (262aa)
Lipolytic protein G-D-S-L family n=2 Tax=Microbacterium RepID=H8E7K0_9MICO
GDSL family lipase {ECO:0000313|EMBL:KIC60328.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
lysophospholipase L1
berkeley_reactor_200306_planktonic_scaffold_145241_44
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(41184..42455)
DNA (1272bp) protein (424aa)
tRNA synthetase class II (G H P and S) n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7J7_9MICO
tRNA synthetase class II (G H P and S) {ECO:0000313|EMBL:EIC07188.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
histidyl-tRNA synthetase
berkeley_reactor_200306_planktonic_scaffold_145241_45
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42487..43116)
DNA (630bp) protein (210aa)
DITP/XTP pyrophosphatase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF38_9MICO
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:KIC60247.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
pyrophosphatase
berkeley_reactor_200306_planktonic_scaffold_145241_46
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43194..44345)
DNA (1152bp) protein (384aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9M7_9MICO
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sodium/proton antiporter
berkeley_reactor_200306_planktonic_scaffold_145241_47
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44509..47181
DNA (2673bp) protein (891aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Phosphoenolpyruvate carboxylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A836_9MICO
ppc; phosphoenolpyruvate carboxylase
berkeley_reactor_200306_planktonic_scaffold_145241_48
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47212..47811)
DNA (600bp) protein (200aa)
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily n=2 Tax=Microbacterium RepID=H8E7J3_9MICO
Transferase {ECO:0000313|EMBL:KIC60325.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
berkeley_reactor_200306_planktonic_scaffold_145241_49
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47928..49286
DNA (1359bp) protein (453aa)
glutamate dehydrogenase (EC:1.4.1.4)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037E125C
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_145241_50
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49292..50722
DNA (1431bp) protein (477aa)
Basic amino acid/polyamine antiporter (APA) family transporter n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA52_9MICO
Basic amino acid/polyamine antiporter (APA) family transporter {ECO:0000313|EMBL:EPD85311.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
amino acid APC transporter
berkeley_reactor_200306_planktonic_scaffold_145241_51
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50734..54360)
DNA (3627bp) protein (1209aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Transcription-repair-coupling factor n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF35_9MICO
mfd; transcription-repair coupling factor
berkeley_reactor_200306_planktonic_scaffold_145241_52
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54463..55170
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7J0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07181.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Tfp pilus assembly protein PilP
berkeley_reactor_200306_planktonic_scaffold_145241_53
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55214..55798)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Peptidyl-tRNA hydrolase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A832_9MICO
peptidyl-tRNA hydrolase
berkeley_reactor_200306_planktonic_scaffold_145241_54
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(55881..56504)
DNA (624bp) protein (208aa)
50S ribosomal protein L25 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7I8_9MICO
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplY; ribosomal protein L25
berkeley_reactor_200306_planktonic_scaffold_145241_55
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56781..56903
DNA (123bp) protein (41aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7I7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07178.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
berkeley_reactor_200306_planktonic_scaffold_145241_56
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56946..57362)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF31_9MICO
Shikimate kinase {ECO:0000313|EMBL:KIC60323.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
gntK; gluconokinase
berkeley_reactor_200306_planktonic_scaffold_145241_57
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57479..57985)
DNA (507bp) protein (169aa)
Carbohydrate kinase, thermoresistant glucokinase family n=2 Tax=Microbacterium RepID=H8E7I5_9MICO
Thermoresistant glucokinase family carbohydrate kinase {ECO:0000313|EMBL:EPD85304.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
gluconokinase
berkeley_reactor_200306_planktonic_scaffold_145241_58
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57988..59016)
DNA (1029bp) protein (343aa)
Alcohol dehydrogenase zinc-binding domain protein n=2 Tax=Microbacterium RepID=H8E7I4_9MICO
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EIC07175.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
threonine dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_145241_59
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59033..59800)
DNA (768bp) protein (256aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:KIC60238.1}; EC=1.1.1.69 {ECO:0000313|EMBL:KIC60238.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Short-chain dehydrogenase/reductase SDR n=2 Tax=Microbacterium RepID=H8E7I3_9MICO
dehydrogenase with different specificities
Displaying items 31-60 of 120 in total

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