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berkeley_reactor_200306_planktonic_scaffold_145241

Search features with annotation key words

Displaying items 61-90 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_145241_60
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59793..61178)
DNA (1386bp) protein (462aa)
Gluconate:H+ symporter (GntP) family transporter n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA45_9MICO
Permease {ECO:0000313|EMBL:KIC60237.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
H+/gluconate symporter
berkeley_reactor_200306_planktonic_scaffold_145241_61
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61346..62050
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF27_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ53018.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_145241_62
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62065..62799)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9L4_9MICO
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KIC60235.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
berkeley_reactor_200306_planktonic_scaffold_145241_63
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62852..64267)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A825_9MICO
MFS transporter {ECO:0000313|EMBL:KIC60234.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
permease of the major facilitator superfamily
berkeley_reactor_200306_planktonic_scaffold_145241_64
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64395..65192)
DNA (798bp) protein (266aa)
Regulatory protein IclR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7I1_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC60233.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_145241_65
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(65232..66335)
DNA (1104bp) protein (368aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7I0_9MICO
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KIC60232.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
phosphoglycerate dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_145241_66
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66435..67364
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF23_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85295.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
3-hydroxyisobutyrate dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_145241_67
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67394..68887
DNA (1494bp) protein (498aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9L1_9MICO
gnd; 6-phosphogluconate dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_145241_68
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68996..70009)
DNA (1014bp) protein (338aa)
Magnesium and cobalt transporter CorA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A822_9MICO
Magnesium and cobalt transporter CorA {ECO:0000313|EMBL:EPD85293.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
metal ion transport protein
berkeley_reactor_200306_planktonic_scaffold_145241_69
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70047..70826)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT60_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85292.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
peptide ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_145241_70
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70823..72319)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377F518
Membrane protein {ECO:0000313|EMBL:KIC60228.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
peptide ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_145241_71
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72458..73237
DNA (780bp) protein (260aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7H5_9MICO
Response regulator receiver {ECO:0000313|EMBL:EIC07166.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
berkeley_reactor_200306_planktonic_scaffold_145241_72
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73234..74799
DNA (1566bp) protein (522aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A819_9MICO
signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_145241_73
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74871..75329
DNA (459bp) protein (153aa)
acetyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI000346B1CE
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADG76483.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
berkeley_reactor_200306_planktonic_scaffold_145241_74
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75390..76940)
DNA (1551bp) protein (517aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7H2_9MICO
Flavodoxin reductase {ECO:0000313|EMBL:KIC60225.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
berkeley_reactor_200306_planktonic_scaffold_145241_75
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76940..77812)
DNA (873bp) protein (291aa)
ApbE family lipoprotein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7H1_9MICO
Membrane protein {ECO:0000313|EMBL:KIC60224.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
membrane-associated lipoprotein
berkeley_reactor_200306_planktonic_scaffold_145241_76
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77839..78339)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF15_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60223.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_145241_77
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78475..81195)
DNA (2721bp) protein (907aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7G9_9MICO
Carbonate dehydratase {ECO:0000313|EMBL:EXJ53005.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
P-type HAD superfamily ATPase
berkeley_reactor_200306_planktonic_scaffold_145241_78
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81265..82299)
DNA (1035bp) protein (345aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9J9_9MICO
psrA; phosphoribosylpyrophosphate synthetase
berkeley_reactor_200306_planktonic_scaffold_145241_79
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82274..83746)
DNA (1473bp) protein (491aa)
Bifunctional protein GlmU n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A816_9MICO
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glmU; N-acetylglucosamine-1-phosphate uridyltransferase
berkeley_reactor_200306_planktonic_scaffold_145241_trna_1
unknown

Not on your lists

comp(83748..83819)
DNA (72bp)
transferRNA Gln
berkeley_reactor_200306_planktonic_scaffold_145241_80
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83895..84176)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7G6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07157.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_145241_81
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84176..84337)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7G5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07156.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_145241_82
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84376..86061)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF11_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85280.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
berkeley_reactor_200306_planktonic_scaffold_145241_83
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86157..86654
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9J3_9MICO
MarR family transcriptional regulator {ECO:0000313|EMBL:KIC60218.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
marR; transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_145241_84
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86750..88546)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A813_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85278.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
oleandomycin resistance ATPase
berkeley_reactor_200306_planktonic_scaffold_145241_85
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88580..89893)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT49_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52997.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
acetyltransferase
berkeley_reactor_200306_planktonic_scaffold_145241_86
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89933..90874)
DNA (942bp) protein (314aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Microbacterium RepID=H8E7F1_9MICO
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase
berkeley_reactor_200306_planktonic_scaffold_145241_87
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90871..91935)
DNA (1065bp) protein (355aa)
Aldo/keto reductase n=2 Tax=Microbacterium RepID=H8E7F0_9MICO
Aldo/keto reductase {ECO:0000313|EMBL:KIC60213.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
oxidoreductase
berkeley_reactor_200306_planktonic_scaffold_145241_88
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92044..93642
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9J1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85274.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
Displaying items 61-90 of 120 in total

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