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berkeley_reactor_200306_planktonic_scaffold_147250

Search features with annotation key words

Displaying items 31-60 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_147250_31
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31430..32218
DNA (789bp) protein (263aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E1R1_9MICO
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EXJ52531.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
oppD; dipeptide/oligopeptide/nickel ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_147250_32
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32215..33036
DNA (822bp) protein (274aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E1R0_9MICO
Diguanylate cyclase {ECO:0000313|EMBL:KIC58295.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
oligopeptide ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_147250_33
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33056..34141
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC24_9MICO
Peptidase M4 {ECO:0000313|EMBL:KIC58294.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
zinc metalloprotease
berkeley_reactor_200306_planktonic_scaffold_147250_34
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34167..34454
DNA (288bp) protein (96aa)
TPR repeat, SEL1 subfamily n=2 Tax=Microbacterium RepID=H8E1Q8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86669.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
berkeley_reactor_200306_planktonic_scaffold_147250_35
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34664..35284)
DNA (621bp) protein (207aa)
GCN5-related N-acetyltransferase n=2 Tax=Microbacterium RepID=H8E1Q7_9MICO
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:KIC58292.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sortase
berkeley_reactor_200306_planktonic_scaffold_147250_36
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35290..35979)
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Uracil-DNA glycosylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1Q6_9MICO
ung; uracil DNA glycosylase
berkeley_reactor_200306_planktonic_scaffold_147250_37
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35979..36479)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXB4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86672.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
phosphoribosyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_38
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36540..38042
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC30_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86673.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
permease of the major facilitator superfamily
berkeley_reactor_200306_planktonic_scaffold_147250_39
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38072..38827)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDG3_9MICO
Oxidoreductase {ECO:0000313|EMBL:KIC58289.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
short-chain alcohol dehydrogenase of unknown specificity
berkeley_reactor_200306_planktonic_scaffold_147250_40
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39023..40345
DNA (1323bp) protein (441aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1Q2_9MICO
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:EIC09072.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
cysD; O-acetylhomoserine sulfhydrylase
berkeley_reactor_200306_planktonic_scaffold_147250_41
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40494..41696
DNA (1203bp) protein (401aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Homoserine O-acetyltransferase n=2 Tax=Microbacterium RepID=H8E1Q1_9MICO
metX; homoserine acetyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_42
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41763..46166)
DNA (4404bp) protein (1468aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B714BC
Uncharacterized protein {ECO:0000313|EMBL:AEI10685.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_43
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46306..47502)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXC0_9MICO
MFS transporter {ECO:0000313|EMBL:EXJ52521.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
arabinose efflux permease
berkeley_reactor_200306_planktonic_scaffold_147250_44
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47575..47907)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1P9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09069.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_45
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47935..49185)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E1P8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC58285.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_46
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49209..50117)
DNA (909bp) protein (303aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=2 Tax=Microbacterium RepID=H8E1P7_9MICO
sugar kinase
berkeley_reactor_200306_planktonic_scaffold_147250_47
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50138..51214
DNA (1077bp) protein (359aa)
NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=Microbacterium RepID=H8E1P6_9MICO
Oxidoreductase {ECO:0000313|EMBL:EXJ52517.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NADH:flavin oxidoreductase, Old Yellow Enzyme family
berkeley_reactor_200306_planktonic_scaffold_147250_48
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51326..52381)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E1P5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09065.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hemolysins
berkeley_reactor_200306_planktonic_scaffold_147250_49
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52378..53709)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1P4_9MICO
Membrane protein {ECO:0000313|EMBL:EXJ52515.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hemolysins
berkeley_reactor_200306_planktonic_scaffold_147250_50
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53791..54468
DNA (678bp) protein (226aa)
Putative cetyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YR94_9MICO
Putative cetyltransferase {ECO:0000313|EMBL:GAD35559.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
acetyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_51
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54735..56075
DNA (1341bp) protein (447aa)
Gp35 n=1 Tax=Mycobacterium phage Rebeuca RepID=J7KF86_9CAUD
Resolvase, N terminal domain protein {ECO:0000313|EMBL:CCQ44342.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
resolvase domain
berkeley_reactor_200306_planktonic_scaffold_147250_52
unknown

Not on your lists

56425..56676
DNA (252bp) protein (84aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_53
unknown

Not on your lists

56813..57502
DNA (690bp) protein (230aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_54
unknown

Not on your lists

57499..57726
DNA (228bp) protein (76aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_55
unknown

Not on your lists

comp(57694..58206)
DNA (513bp) protein (171aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_56
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58648..59124
DNA (477bp) protein (159aa)
Bacteriophage protein n=1 Tax=Streptomyces sp. W007 RepID=H0BPW0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCQ44676.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
berkeley_reactor_200306_planktonic_scaffold_147250_57
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59146..60873
DNA (1728bp) protein (576aa)
Terminase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q2D7_STANL
Phage Terminase family protein {ECO:0000313|EMBL:CCQ44675.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
terminase
berkeley_reactor_200306_planktonic_scaffold_147250_58
unknown

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60899..61087
DNA (189bp) protein (63aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_59
unknown

Not on your lists

61084..61260
DNA (177bp) protein (59aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_60
unknown

Not on your lists

61277..61474
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 31-60 of 252 in total

View Taxonomy