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berkeley_reactor_200306_planktonic_scaffold_147250

Search features with annotation key words

Displaying items 61-90 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_147250_61
unknown

Not on your lists

61471..61728
DNA (258bp) protein (86aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_62
unknown

Not on your lists

61725..62012
DNA (288bp) protein (96aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_63
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62095..64065
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W212_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD33808.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_64
unknown

Not on your lists

64070..64660
DNA (591bp) protein (197aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_65
unknown

Not on your lists

64676..64933
DNA (258bp) protein (86aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_66
unknown

Not on your lists

64930..65247
DNA (318bp) protein (106aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_67
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65454..66110
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. W007 RepID=H0BQ03_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCQ44647.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_68
unknown

Not on your lists

comp(66211..66369)
DNA (159bp) protein (53aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_147250_69
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66658..68115)
DNA (1458bp) protein (486aa)
Inosine 5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EXJ52514.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EXJ52514.1};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
IMP dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEJ2_9MICO
guaB; IMP dehydrogenase/GMP reductase
berkeley_reactor_200306_planktonic_scaffold_147250_70
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68238..71957
DNA (3720bp) protein (1240aa)
Alpha-ketoglutarate decarboxylase {ECO:0000313|EMBL:KIC58279.1}; EC=4.1.1.71 {ECO:0000313|EMBL:KIC58279.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1P0_9MICO
kgd; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component
berkeley_reactor_200306_planktonic_scaffold_147250_71
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71998..72906
DNA (909bp) protein (303aa)
YegS//BmrU family lipid kinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDJ4_9MICO
Diacylglycerol kinase {ECO:0000313|EMBL:KIC58276.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
diacylglycerol kinase
berkeley_reactor_200306_planktonic_scaffold_147250_72
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72952..73197)
DNA (246bp) protein (82aa)
Transmembrane transcriptional regulator n=2 Tax=Microbacterium RepID=H8E1N7_9MICO
Transmembrane transcriptional regulator {ECO:0000313|EMBL:EIC09057.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transmembrane transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_147250_73
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73194..73937)
DNA (744bp) protein (248aa)
RNA polymerase sigma-70 factor n=2 Tax=Microbacterium RepID=H8E1N6_9MICO
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EXJ52510.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
berkeley_reactor_200306_planktonic_scaffold_147250_74
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74021..75379
DNA (1359bp) protein (453aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Microbacterium RepID=H8E1N5_9MICO
5-enolpyruvylshikimate-3-phosphate synthase
berkeley_reactor_200306_planktonic_scaffold_147250_75
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75381..76418
DNA (1038bp) protein (346aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Microbacterium RepID=H8E1N4_9MICO
GTPase
berkeley_reactor_200306_planktonic_scaffold_147250_76
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76434..76901
DNA (468bp) protein (156aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=2 Tax=Microbacterium RepID=H8E1N3_9MICO
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EIC09053.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
bcp; peroxiredoxin
berkeley_reactor_200306_planktonic_scaffold_147250_77
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76921..77316)
DNA (396bp) protein (132aa)
Signal transduction histidine kinase n=2 Tax=Microbacterium RepID=H8E1N2_9MICO
Histidine kinase {ECO:0000313|EMBL:EXJ52506.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_147250_78
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77531..77779
DNA (249bp) protein (83aa)
Transcriptional regulator WhiB n=2 Tax=Microbacterium RepID=H8E1N1_9MICO
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
regulatory protein
berkeley_reactor_200306_planktonic_scaffold_147250_79
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77796..79289)
DNA (1494bp) protein (498aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXF6_9MICO
signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_147250_80
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79342..80583)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1M9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09049.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
putative septum formation inhibitor-activating ATPase
berkeley_reactor_200306_planktonic_scaffold_147250_81
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80580..81209)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDL4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86699.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_82
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81308..81589
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E1M7_9MICO
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EPD86700.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_83
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81606..82208)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEL5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86701.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_84
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82361..82801
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXG0_9MICO
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EIC09045.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
3-hydroxyacyl-CoA dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_147250_85
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82842..84065)
DNA (1224bp) protein (408aa)
Aminotransferase class I and II n=2 Tax=Microbacterium RepID=H8E1M4_9MICO
Aminotransferase {ECO:0000313|EMBL:KIC58264.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
aspC; aspartate/tyrosine/aromatic aminotransferase
berkeley_reactor_200306_planktonic_scaffold_147250_86
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84138..86933)
DNA (2796bp) protein (932aa)
Protein translocase subunit SecA n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1M3_9MICO
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
secA; preprotein translocase subunit SecA
berkeley_reactor_200306_planktonic_scaffold_147250_87
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87077..88408
DNA (1332bp) protein (444aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E1M2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52496.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_88
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88523..89185)
DNA (663bp) protein (221aa)
Ribosomal subunit interface protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1M1_9MICO
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIC09041.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ribosome-associated protein Y (PSrp-1)
berkeley_reactor_200306_planktonic_scaffold_147250_89
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89327..89998)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXG3_9MICO
Amidophosphoribosyltransferase {ECO:0000313|EMBL:EXJ52494.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
amidophosphoribosyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_90
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90099..91787)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC83_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52571.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
Displaying items 61-90 of 252 in total

View Taxonomy