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berkeley_reactor_200306_planktonic_scaffold_147250_88

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(88523..89185)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1M1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 220.0
  • Bit_score: 427
  • Evalue 5.40e-117
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIC09041.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 220.0
  • Bit_score: 427
  • Evalue 7.60e-117
ribosome-associated protein Y (PSrp-1) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 214.0
  • Bit_score: 335
  • Evalue 1.00e-89

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGAAACTAGCATCGTCGGCGTGGGCGTGAGCATCTCCGATCGTTTCCGCACCGTCACCGAAGAGAAGTCCGTTCGCATCGGAACGCTGGCGCCGCGGGCGCAGCGGCTCGACGTCAAGGTCACTCACCGCGCCTATCACAACGGCAGTCGCGAGGAGGAGACCGTCGAGCTCACCGTCACCGGCAAGGGCCCGCTGGTGCGTGCGGAGGCCACCGACGGCGACAAGTTCACGGCGCTGGACATGGCCGTCGACAAGCTCGCCGAGCAGTTGCGGCGTGCCAAGGACAAGAGGGTGGATGCCCGTAACCACCCGCGGGGAGCCAAGCTGGACAAGGGCAGCGGCGCGCTCTCCGGCATCGATCTGCAGCCGGCCTCGGTCGAGACGCTGCGTGCCGTCGCGACCGGCGAGATCCCGATCGCCGTGGGCGACGAGGGCGAGGACGACTACACCCCCGTCGTCATCCGCACGAAGAACTTCGACGCCGAGTGGATGACGGTCGAGGAGGCCGTGGACCGGATGGAGCTCGTGGGCCACGACTTCTTCCTCTTCATCGACGCGCGCACCGATCACCCGAGCGTCGTCTATCGCCGCAAGGGCTGGGACTACGGCGTCATCTCGCTGACGGCCAGTGCGCCGCCGGCGCGGGAGCTCGCGTCCTGA
PROTEIN sequence
Length: 221
METSIVGVGVSISDRFRTVTEEKSVRIGTLAPRAQRLDVKVTHRAYHNGSREEETVELTVTGKGPLVRAEATDGDKFTALDMAVDKLAEQLRRAKDKRVDARNHPRGAKLDKGSGALSGIDLQPASVETLRAVATGEIPIAVGDEGEDDYTPVVIRTKNFDAEWMTVEEAVDRMELVGHDFFLFIDARTDHPSVVYRRKGWDYGVISLTASAPPARELAS*