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berkeley_reactor_200306_planktonic_scaffold_147250

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Displaying items 151-180 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_147250_151
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

159882..161678
DNA (1797bp) protein (599aa)
Acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACB5_9MICO
Acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EPD86753.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
accC; acetyl/propionyl-CoA carboxylase, alpha subunit
berkeley_reactor_200306_planktonic_scaffold_147250_152
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

161680..162126
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDR4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59590.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_147250_153
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162181..163632)
DNA (1452bp) protein (484aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Microbacterium RepID=H8E1F9_9MICO
Flavoprotein disulfide reductase {ECO:0000313|EMBL:KIC59591.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
lpdA; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component
berkeley_reactor_200306_planktonic_scaffold_147250_154
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

163749..164573
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=2 Tax=Microbacterium RepID=H8E1F8_9MICO
berkeley_reactor_200306_planktonic_scaffold_147250_155
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164570..166261
DNA (1692bp) protein (564aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1F7_9MICO
Phosphomannomutase {ECO:0000313|EMBL:KIC59593.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
cpsG; phosphomannomutase
berkeley_reactor_200306_planktonic_scaffold_147250_156
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166386..168311)
DNA (1926bp) protein (642aa)
PRD domain protein n=2 Tax=Microbacterium RepID=H8E1F5_9MICO
Transcriptional antiterminator {ECO:0000313|EMBL:KIC59594.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional antiterminator
berkeley_reactor_200306_planktonic_scaffold_147250_157
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

168421..168765
DNA (345bp) protein (115aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=2 Tax=Microbacterium RepID=H8E1F4_9MICO
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EIC08974.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phosphotransferase system cellobiose-specific component IIB
berkeley_reactor_200306_planktonic_scaffold_147250_158
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

168762..169037
DNA (276bp) protein (92aa)
Phosphocarrier, HPr family n=2 Tax=Microbacterium RepID=H8E1F3_9MICO
Phosphotransferase {ECO:0000313|EMBL:KIC59596.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
phosphotransferase system, HPr-related protein
berkeley_reactor_200306_planktonic_scaffold_147250_159
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

169058..170722
DNA (1665bp) protein (555aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1F2_9MICO
ptsI; phosphoenolpyruvate-protein kinase
berkeley_reactor_200306_planktonic_scaffold_147250_160
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

170755..172425
DNA (1671bp) protein (557aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=2 Tax=Microbacterium RepID=H8E1F1_9MICO
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EIC08971.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phosphotransferase system, mannitol-specific IIBC component
berkeley_reactor_200306_planktonic_scaffold_147250_161
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

172501..172995
DNA (495bp) protein (165aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=2 Tax=Microbacterium RepID=H8E1F0_9MICO
PTS mannitol transporter subunit IIA {ECO:0000313|EMBL:KIC59598.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
mtlD; mannitol/fructose-specific phosphotransferase system, IIA domain
berkeley_reactor_200306_planktonic_scaffold_147250_162
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

172995..174143
DNA (1149bp) protein (383aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1E9_9MICO
mtlD; mannitol-1-phosphate/altronate dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_147250_163
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

174189..174938
DNA (750bp) protein (250aa)
Predicted hydrolase or acyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCD0_MICTS
Hydrolase {ECO:0000313|EMBL:KIC59600.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hydrolase or acyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_164
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

175340..176152
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036E4A68
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIC08968.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
berkeley_reactor_200306_planktonic_scaffold_147250_165
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(176227..177342)
DNA (1116bp) protein (372aa)
Adenosine deaminase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1E7_9MICO
Adenosine deaminase {ECO:0000313|EMBL:EXJ53191.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
add; adenosine deaminase
berkeley_reactor_200306_planktonic_scaffold_147250_166
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(177385..178692)
DNA (1308bp) protein (436aa)
Thymidine phosphorylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACC7_9MICO
Thymidine phosphorylase {ECO:0000313|EMBL:EPD86768.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
deoA; thymidine phosphorylase
berkeley_reactor_200306_planktonic_scaffold_147250_167
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(178689..179090)
DNA (402bp) protein (134aa)
Cytidine deaminase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1E5_9MICO
Cytidine deaminase {ECO:0000313|EMBL:KIC59627.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
cytidine deaminase
berkeley_reactor_200306_planktonic_scaffold_147250_168
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(179099..180394)
DNA (1296bp) protein (432aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E1E4_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08964.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_147250_169
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(180391..181722)
DNA (1332bp) protein (444aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1E3_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08963.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Ribose ABC transport system, permease protein RbsC
berkeley_reactor_200306_planktonic_scaffold_147250_170
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(181719..183233)
DNA (1515bp) protein (505aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E1E2_9MICO
Simple sugar transport system ATP-binding protein {ECO:0000313|EMBL:EPD86772.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
putative sugar ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_147250_171
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(183335..184465)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACD2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86773.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ABC transporter periplasmic protein
berkeley_reactor_200306_planktonic_scaffold_147250_172
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(184627..185742)
DNA (1116bp) protein (372aa)
Nucleotidyl transferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1E0_9MICO
Nucleotidyl transferase {ECO:0000313|EMBL:EIC08960.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
manC; mannose-1-phosphate guanylyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_173
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

185982..186416
DNA (435bp) protein (145aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1D9_9MICO
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EIC08959.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
succinate dehydrogenase/fumarate reductase, cytochrome b subunit
berkeley_reactor_200306_planktonic_scaffold_147250_174
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

186416..186886
DNA (471bp) protein (157aa)
Succinate dehydrogenase cytochrome b subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1D8_9MICO
Succinate dehydrogenase cytochrome b subunit {ECO:0000313|EMBL:EIC08958.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit
berkeley_reactor_200306_planktonic_scaffold_147250_175
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

186926..188752
DNA (1827bp) protein (609aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXL9_9MICO
sdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit
berkeley_reactor_200306_planktonic_scaffold_147250_176
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

188752..189525
DNA (774bp) protein (258aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=2 Tax=Microbacterium RepID=H8E1D6_9MICO
sdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
berkeley_reactor_200306_planktonic_scaffold_147250_177
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

189625..190785
DNA (1161bp) protein (387aa)
Ribonuclease BN n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1D5_9MICO
Ribonuclease BN {ECO:0000313|EMBL:EIC08955.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_178
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

190838..191671
DNA (834bp) protein (278aa)
Exodeoxyribonuclease III Xth n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1D4_9MICO
Exodeoxyribonuclease III {ECO:0000313|EMBL:KIC59612.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
exonuclease III
berkeley_reactor_200306_planktonic_scaffold_147250_179
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

191734..192738
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Tryptophan--tRNA ligase n=2 Tax=Microbacterium RepID=H8E1D0_9MICO
trpS; tryptophanyl-tRNA synthetase
berkeley_reactor_200306_planktonic_scaffold_147250_180
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(192855..193685)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1C9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08949.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
Displaying items 151-180 of 252 in total

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