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berkeley_reactor_200306_planktonic_scaffold_147250

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Displaying items 211-240 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_147250_211
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(224483..225097)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000368DB91
Uncharacterized protein {ECO:0000313|EMBL:KHK95481.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
TetR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_147250_212
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

225328..226341
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034C0BE4
sulfonate ABC transporter, solute-binding protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
berkeley_reactor_200306_planktonic_scaffold_147250_213
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

226341..227114
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00036EAD0B
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
berkeley_reactor_200306_planktonic_scaffold_147250_214
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

227114..227953
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034C63A5
ABC-type nitrate/sulfonate transport system, permease component
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
berkeley_reactor_200306_planktonic_scaffold_147250_215
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

227950..228753
DNA (804bp) protein (268aa)
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:KJL33151.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL33151.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034D95D6
ABC transporter ATP-binding protein
berkeley_reactor_200306_planktonic_scaffold_147250_216
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

228754..231069
DNA (2316bp) protein (772aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003491824
Arylsulfatase {ECO:0000313|EMBL:KHK95484.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Sulfatase
berkeley_reactor_200306_planktonic_scaffold_147250_217
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(231159..232652)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037B1D43
Amino acid permease {ECO:0000313|EMBL:EYT56170.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
amino acid transporters
berkeley_reactor_200306_planktonic_scaffold_147250_218
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

232986..233984
DNA (999bp) protein (333aa)
bifunctional carbohydrate binding and transport protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A539
sugar ABC transporter periplasmic protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:BAJ73631.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_147250_219
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

234067..235527
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034C10BD
sugar ABC transporter ATPase
Tax=RBG_16_Spirochaete_67_19_curated
berkeley_reactor_200306_planktonic_scaffold_147250_220
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235533..236555
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034B7F8E
Sugar ABC transporter {ECO:0000313|EMBL:EHH02634.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_221
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

236603..237196
DNA (594bp) protein (198aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCY4_MICTS
Transcriptional regulator {ECO:0000313|EMBL:KEP76134.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_147250_222
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

237374..238321
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344CD31
Transcriptional activator NphR {ECO:0000313|EMBL:KJL32840.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
AraC family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_147250_223
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(238341..239150)
DNA (810bp) protein (270aa)
Glucose 1-dehydrogenase 4 {ECO:0000313|EMBL:KJL27059.1}; EC=1.1.1.47 {ECO:0000313|EMBL:KJL27059.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FFE462
dehydrogenase with different specificities
berkeley_reactor_200306_planktonic_scaffold_147250_224
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(239189..239911)
DNA (723bp) protein (241aa)
Dehydrogenase with different specificities n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCY7_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KEP76137.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
dehydrogenase with different specificities
berkeley_reactor_200306_planktonic_scaffold_147250_225
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

240122..240961
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCY9_MICTS
MoaF protein {ECO:0000313|EMBL:KHK95492.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_226
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

240963..242606
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K649_9MICO
Amidohydrolase {ECO:0000313|EMBL:KHK95493.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
amidohydrolase 3
berkeley_reactor_200306_planktonic_scaffold_147250_227
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242683..244125)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIV5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM76018.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
NAD-dependent aldehyde dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_147250_228
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

244389..246053
DNA (1665bp) protein (555aa)
Thiamine pyrophosphate central domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1A9_9MICO
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:EXJ51115.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
thiamine pyrophosphate central domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_147250_229
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

246300..248063
DNA (1764bp) protein (588aa)
Na+/H+ antiporter n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AJ14_9MICO
Sodium:proton antiporter {ECO:0000313|EMBL:KIC58486.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
NhaP-type Na+/H+ and K+/H+ antiporters
berkeley_reactor_200306_planktonic_scaffold_147250_230
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(248152..250047)
DNA (1896bp) protein (632aa)
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEV2_9MICO
Phenol 2-monooxygenase {ECO:0000313|EMBL:EPD86806.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
berkeley_reactor_200306_planktonic_scaffold_147250_231
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(250066..251454)
DNA (1389bp) protein (463aa)
Major facilitator superfamily MFS_1 n=2 Tax=Microbacterium RepID=H8E1A6_9MICO
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EIC08926.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
yhjE; inner membrane metabolite transport protein YhjE
berkeley_reactor_200306_planktonic_scaffold_147250_232
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

251567..253111
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00037950EB
4-hydroxyphenylacetate degradation bifunctionalisomerase/decarboxylase {ECO:0000313|EMBL:EZP26151.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_233
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

253108..253776
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A6323
Hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
berkeley_reactor_200306_planktonic_scaffold_147250_234
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

253799..255319
DNA (1521bp) protein (507aa)
2-aminomuconic 6-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJL35524.1}; EC=1.2.1.32 {ECO:0000313|EMBL:KJL35524.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dhaS2; aldehyde dehydrogenase DhaS (EC:1.2.1.3)
betaine-aldehyde dehydrogenase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036092E4
berkeley_reactor_200306_planktonic_scaffold_147250_235
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

255349..256512
DNA (1164bp) protein (388aa)
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC:1.13.11.15)
3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Microbacterium barkeri RepID=UPI0002FDF707
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
berkeley_reactor_200306_planktonic_scaffold_147250_236
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

256515..257297
DNA (783bp) protein (261aa)
2-hydroxyhexa-2,4-dienoate hydratase {ECO:0000313|EMBL:KJL26996.1}; EC=4.2.1.132 {ECO:0000313|EMBL:KJL26996.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CB56C
2-keto-4-pentenoate hydratase
berkeley_reactor_200306_planktonic_scaffold_147250_237
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

257354..258085
DNA (732bp) protein (244aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACG4_9MICO
Alpha-dehydro-beta-deoxy-D-glucarate aldolase {ECO:0000313|EMBL:KIC58494.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_147250_238
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

258246..259043
DNA (798bp) protein (266aa)
Transglutaminase domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E199_9MICO
Transglutaminase {ECO:0000313|EMBL:EXJ51113.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transglutaminase domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_147250_239
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

259096..259548
DNA (453bp) protein (151aa)
Regulatory protein MarR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E198_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:EIC08918.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator, MarR family
berkeley_reactor_200306_planktonic_scaffold_147250_240
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

259545..260234
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEW2_9MICO
NAD(P)H dehydrogenase {ECO:0000313|EMBL:KIC58496.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
NAD(P)H dehydrogenase (quinone)
Displaying items 211-240 of 252 in total

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