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berkeley_reactor_200306_planktonic_scaffold_4342_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(12350..18859)

Top 3 Functional Annotations

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Value Algorithm Source
RecBCD enzyme subunit RecD {ECO:0000313|EMBL:KJL34598.1}; EC=3.1.11.5 {ECO:0000313|EMBL:KJL34598.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 2180.0
  • Bit_score: 2944
  • Evalue 0.0
superfamily I DNA and RNA helicase and helicase subunits n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A438 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 2177.0
  • Bit_score: 2221
  • Evalue 0.0
superfamily I DNA and RNA helicase and helicase subunits similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 2213.0
  • Bit_score: 2216
  • Evalue 0.0

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 6510
ATGGGGGAGTTCAACGCGCGCGCTGAGATCGAGGCTGTCCTCGACGTGCTCGTCGACGGTCTGGCGCCACTGGTGGCGGCTCGGTTCGACGAACTCGCACCGGGCATGGGTGAGTGGACAGAGGTCATCGAAGCCAGGGACCGTCAGGCGGGTCGAGGCTCGGCGAGGTACAACCCGCGTGACCTGTCGCTGATCCTCCGCGCGTTCACAGAGTCCTTCGGATCGTTCGGGTACCCGTTCGCGGACTCGCTCAGCCGCCGCGGGAGGAGCCTTGCGAGTGAGCTCCGCGACGTCCGCAACCGGTGGGCGCACAACGAGGACTTCTCGACCGCGGAGGCGTATCGCGCGCTCGACTCCGCGGAGATGCTCCTGCGTGATGTCGGGGCAGAGCAGCAAGCAGATGAGGCGCATCGACGCAAGGCTCCGGTGCTCGCGGCCCTCGCAGCGGCATCCGACATCCCGGCATCATCCTCGTCGACAGAACCCGTCACAGTCGCCCCGGTCGACAGTCGTTCGGAGCCGCCCGCGGCAGCGTCGACCGCCGACGAGAGCGACCCGACGGTGAGTTTGCTTCCACAGATGTCTGCTGCGGCAGCGGAGCTTGAAGGCAAGGCTCGCATACATGTACATTCGCTGCCCGACCTGAGCTACGCCCAGGCGCTGAGCGCTATCCCTGTCGTCTCGGAGGTGACGGTCGATTACCGAGGCCCTGAGTTGCGGGCTGCGTCCATCGAGATCGACGCGATCTGTGCGCTCGGTCCGCTGGGGGACCCGAAGGTCGTGCTGGCTGACCTCGACGGTCGCGCACCTTCCGTGCTGCGCGGAGTTGATCTGACCCTCGACCCTTCTCGCATGCTCTCGGTCGAGAACCCGATGCCAGGTTCGATCCGCGTGACGCTGCGCGACGCCGCGGGCGTGCCCGTCGCGCGCCACGAGAGTCCGGTCGCCGTGCTCGCCGGGAATCAGTGGCGAGCAAACCCGTTGCAGCTCGGAATCGAACTTCTGGCGGCATTCGTTCAGCCGAATTCGCCAGCGATCGCACCGCTGCTCGTCGAGGCGTCCGACCGACTTCAGCAGACGACGGGCAGCCCAGCGCTCGACGGATATCAGCAGGGGTCGCGCGAGCGTGTGGATTCGATCGTGGGGGCGATCTACGAGAGCATGCGAGCTCGCGACATTCGATATTCCGCGCCGCCCGCGAGCTGGGGGCTCGACGGGCAGAAGGTCCGGACGCCCGCCGAGGTCCTCGACGGGCGTATCGGTACCTGTCTCGACACCACGGTCACTTTGGCCGCTGCTCTCGAAGAGGCGGGCATCAACTCGACTCTGTGGTTGCTCGACGGACACATCTTCCTCGGCTATTGGCGCGATGATGCGAGTCTCGACGGCCCTGCGCAGATGGATGCGGCAGAGGCCGTCAACTACGTTGGCCTCGGACAGATCGAGGTCGTTGAGACGACGTTCCTCACCGGAGGGGCGTCGTCGAGGCCCTTCGCCGATGCGCGGCGTCACCACCACACGGAGACTCTCGCTCGTGACACGTCGTTGATTCTCGGGATCACCGACATCATGCAATCGCGGCTTTCCCGCATCTACCCGCTCCCGAGTCGCACCGTCACAGAGTCGGGCGAAGTGAAGATCGTCGAGTATGCAGTGCGGCAGGGCCCTGCCGCGCTTCACTACGCCCCGTCCGAGCAGGCAATCGCGGGCGGATCGCTGCGCGACGTCCCGGCGCGAGTAGGGCAGTGGAAGAACGCGCTTCTCGATCTCAGCCTGAGAAACCGACTGATCAACTACGGCGAAAAGGCGGGCTATCCCCTTGCCGTGCCGCAGCCTTCGATCGCTGCGTTCGAGGACATGGTCAATCAGGGTACTTCGATCAGCCTCGTCCCGAGCGACCGGATCCCCACTGTCGATGGAACTCGCGGCATCCGCTATGGACAGGAGCTGTCGGAAGCGATGCGCGCCGCTCAGCTCGCAGAGCGGAAGCAAGTCTACGTCGGGGTGACCGAGGCGGCCTATGCCACCCGATTGCGTGCGCTCGCGTACAAAGCGCGGACCATCCGCGAAGAGACCGGCGCCAACAACCTCTACCTCGCCTTCGGGATGTTGCGCTGGAGGAGTGGCGACCGCGATCTGCGCTCCCCCCTCGTGCTGGTTCCGGTCTCTCTCGAAGCAGCCGGCGCCGGCAGGACGTTCCGAATCACGCTCGACGAATCGGGTGAGTCCACTCCGAACTATTGTCTGCTCGAGAAGCTCCGCCTGAGCTTCGGACTCGATATCCCAGGGCTCGCCAATCCCGCGCGCGACGAATCCGGCATTGACCTGGCGGCGGCGTTCTCAGCGACCCGTCGGGCCCTCGCCGCGGCGCAGTTGCCTTTCACCGTCGACGACACGGTTGACCTGGCGATCCTGCAGTTCGCGAAGTATCGACTGTGGAAAGACCTCGACGACAACTGGGGTGAGCTCGCGAAGAACCCGCTCGTCAACCACCTCATATACACGCCGACCGCGGAGTTCTCAGATCCGGCGCCCGGGCCGAGGAATGTCGACCTCGACGCACTCAACAACGCGGTCCCCGTCGCAGCTGACTCCTCTCAGCTCGAGGCGGTCGCGGAGGCGGAAGCCGGACGGACTTTCGTCCTTGAAGGACCTCCCGGCACGGGAAAGTCGCAGACCATCACGAACCTTCTCGCACACGCTCTCGCGAAGGGGAAGCGGGTGCTCTTCGTCGCGGAGAAGCGGGCAGCGCTCGATGTTGTCAAAGACCGACTGGATGCTGTGGGTATCGGGCCGTTCGCTCTCGACCTCCATGACAAGGGGGCGCGGCCCGCTGCGGTGCGGGCCCAGATCCGTGCCGCGATCGATGCAATCGCAAGGCCCGATGAGGCGGCTCTCAGCGCGAACCGAGCGACAGCGGACTCAAGTCGCGGGGCGCTGAAACGCTACGCGCAGCGACTGCACGAACCCAACACCGCGGGGCTCTCCCTCTACGCCGCGCGCGCGCAGTTGCTCGCATTGGCTGACGATGCGGAGCCGTTGGAGATTCCTCAAGCGCTGGTCGCGTCCCGCGCCGCAGGGGACTTCGACCGGTTGCGTGAGCTCATGCGGACACTTCCTGAGACGGCAGACTTCGCACACCCGTCGCGGCTGCATCCCTGGGGGTTCGTGCCCTCGTCCGTGCAGGACAGTGTCGCGGTGCACGCGGCTGCGCGGGAGTTTGACGCTGCACTGAACGCTATTCCGACCGAAGGCGAAACGCAGACGCTGCTGGCAACTGCCTCGAGCCCGGAGCATCTCGAGCAGTGGGCTGTGGTGGCGAATGCGCCGCGGTTTTCGGTGGAAGCGTTGGATGCGGTCCACGGGCGCGCGCTCACAGGCGAGATCGGAGCGATTCAGGCCCTGTTGGAGTCCACCGGCGGAGCGCGAGGTTGGTTCTCGGCGGTGGGGCCGGAGGTGCTCCTCAGCGACGTTCACGAGGTGTATCGGGCAGCCGTCGCGGCGGACGCCTCGGGATTCTTCGGTCGACGGAAGCGCCAGCGGGCTGCCCTCGCGGGATTCGGTTCGGCACTTCGCGTTGATCCCCGCACCTACCCGGCGCGCGATGTCACCCCGCTCGTCGCGGAGGTTGTCGGCGCCGCCGAAGAGATTGGGTCTCTCCGCGCGCAACTGATCAGTCTCCCGCTCCCGCTTGTGAGTGCGACATGGACTCCGTACAGCGAAGAGGGCACCGACTCGGTCAAAACCTCGCTCGCCTGGGCGGTGTGGCTGGGTGACGCGTTGTCCGGCGGCGGTGCGGACTTCAAGGTCGGTTTGCGACGCAACTATGCTGCTTCGTCGCCTGCCCCCGACCTCGCCGGGGCGCTCACTCGTCTCGCGGCGGCGTGGCGTGGCTTGGCAGCGGCGATCGGCGACATCGATCGTCGCGATGGCGTTTCGGGTGCCCTCGCGGCGTGGGCCCCACCGGGGGAACTCTTCGCGGTCTGGCGTTCGACATCAGGGGGTCGAAACCTCGCGACGTCCGAGCCCGTCACTCTCGACCGATGGCTTGCCTTCCTGCAACACCTCGAGCCGCTACTCGGCTTCGGGATGTCGCGTGCCCACAACTCGCTGTTGACAGGAGCGGTCCCCGCAGACCTTGCGTACCTCGCGCTGGAGCGCGGAATTGCGGATGCGTCGATTCGAGAGCGCGAGGAGTCGCAGGCCATGGTGTCATTCGACGTCGCGGCGCACAACCGTGCCATCACGCGGTTCACTACGAGCGCAGCATCCATCCGTGCCGAACTGCCCCGCGCGATTCCTGCGGAGATCCTTGCCCAGCGTCGAATCGATCCGGCCTTCGACGGCGGGATGATGGGCGAACTCAAACGTCAGTTGGGTCGTCAACGCGGTGGTATGGCGGTCCGTACGCTTTTCGAACACTACGGCGATCTGATCACGCAGATTGCCCCGTGCGTGCTCATGAGCCCGGAGTCGGTTGCCCGCTTCTTCCCGGCTCGCGCTGCGATGTTCGACATCGTGGTTTTCGACGAGGCGTCGCAGATCCGCGTGGCTGATGCGGTCGGGGCGATGGGCAGGGCCGGGTCGGTCGTGGTGGTCGGGGACAGCAAGCAGATGCCGCCCTCGAGCTTCGCGGAGGTCAGTAGCGACATCGAGTCCGACCCCTCGTCGTTCGCGGATCAGGTCCTCGATGAGGAGTCGATTCTCACCGAGTGTGTGCAGGCGCGGGTGTCGCGAAAGTGGCTCTCGTGGCATTACCGCAGCCAGGATGAGGCGCTCATCAGCTTCAGCAACCAGGCCTACTACGACAGTCGACTCTCGTCGTTCCCCGCTCCGTGGCCGCACGCGGGTGACAACGCGCGCGCCGATCATGGGATCTCGCTCGTGCGAGTCGACGGGCGGTTCAATCGCTCCGGTCGCGGCAAGGACCTGCGCACGAACGCAGCCGAGGCAGGGGCCATCGTCCGAGAGGTCACCCGCCGGTTCGAGATGTCCGTCGAGAGCACACCTTCGGTAGGGATCATCACGTTCAACTCGCAGCAACGCACGTACATTGAGGCGCTCCTCCGAGAGTCGCCGAACGAACGAATCGCGCAGGCGCTTGACGAACGGGATGGATTGTTCGTCAAGAATCTCGAGAACGTACAGGGAGACGAGCGAGACACGATCTTGTTCTCAGTCGCCTTCAGCGCGAACGATCGAGGCGTCGTCCCCCTGAACTTCGGTCCGCTTTCGCGGGCCGGTGGGGAACGGAGGCTGAATGTCGCCATCACCCGCGCGCGTCGTCAAGTCGTGCTCTTCGCGAGTTTTGACCCGTCTGATCTGCGAGCTGAAGAGACCTCTTCGGTCGGCATCAAGCACCTGCGAGCGTACCTTGAGATGGCGGCATCCGGTGTCGAGTCGAGCGACGGCATGAGTCGTGAGCGTCTCGTCGACCGTCACCGGGACGAGATCGCAGCTGCGCTGCGTTCCCGGGGGTTTGCGGTGCGTACGGACATCGGCCTTTCGGACTTCCGCGTCGACATCTCGATAGCGGATGCCGCAGAGCCCGCCCTGCCGCTCGTCGCGGTGCTGCTAGACGGGGAGAGCTGGCGGGCGCGTCGAACAGTCGCGGATCGTGACGGTTTGCCGGTCGACGTGCTCAAGGGGCTCATGGGATGGCCCGCGGTCGAACGCGTATGGCTGCCCGAATGGATGCAGCAGCGTGAGGAGACGATCGATCGTCTGGGCGCGGCAGTTGAGGCCGCGAAAGCTGGTGTCGAGGCTGCTGAGCCTGTGGCAGCTGAGGCTACTGGGGTGGCGACACTCCCGGTGTCGAGCGAGGATGACGCTGAGCTTGGTATTCGCGATGTCGCCGACATCGGGGTCGGCGCCGCGCCGGAAGTGCCCGCCCCGGTCAGATCCGCGCCGGCGCCGACATCCGGTGTCGCGAGTGCCGAGCTGCGGCATCCGCGCGTGCGTCAGTTCACGCCCTGGACCCCGAGCAGGTCGGGGTCGATTGAGACCCTCGACGATCTTCCCGATCGTCGGGCCGTGGATCAGGTGCGAACGGTGATCACCAAGATCGTCGAATCGGAGGGTCCGATCCATCGTGAGCGTCTCGCGCGACTCGCCGCAGAGAGCTTCGGACTGAGCCGGGTCGCGCCAGCGCGGATGGATGCCATCCTGCGGTGCCTTTCATCAGATCATGTGCGCGCGGCGGACAAGTCGTGTGCCTGGCCGAGCGGTATCGAGCCTGACCGATGGCGTGATGTCCGAGTGAGCTCGCCGGGTGACGGTCGTCCGCTGGAGCACGTGCCGCTCGACGAGATCGCGAATGCGATGGCTGTCGCCGCGGAGCTCGGAGGCGGGATGGCAGAGGGAGAGCTGAAGAGGCAGGCCCTCAACATGTTCGGCGGCAAGCGGGTGACGGCGGGTATCGACGCAATCCTCACGGCAGCGCTGACCCGCGCGGTGAAAACGGGTCGGATCGCGAGGGACGAACGAGGCGTCTTCCTCGCCCAGGGGTAG
PROTEIN sequence
Length: 2170
MGEFNARAEIEAVLDVLVDGLAPLVAARFDELAPGMGEWTEVIEARDRQAGRGSARYNPRDLSLILRAFTESFGSFGYPFADSLSRRGRSLASELRDVRNRWAHNEDFSTAEAYRALDSAEMLLRDVGAEQQADEAHRRKAPVLAALAAASDIPASSSSTEPVTVAPVDSRSEPPAAASTADESDPTVSLLPQMSAAAAELEGKARIHVHSLPDLSYAQALSAIPVVSEVTVDYRGPELRAASIEIDAICALGPLGDPKVVLADLDGRAPSVLRGVDLTLDPSRMLSVENPMPGSIRVTLRDAAGVPVARHESPVAVLAGNQWRANPLQLGIELLAAFVQPNSPAIAPLLVEASDRLQQTTGSPALDGYQQGSRERVDSIVGAIYESMRARDIRYSAPPASWGLDGQKVRTPAEVLDGRIGTCLDTTVTLAAALEEAGINSTLWLLDGHIFLGYWRDDASLDGPAQMDAAEAVNYVGLGQIEVVETTFLTGGASSRPFADARRHHHTETLARDTSLILGITDIMQSRLSRIYPLPSRTVTESGEVKIVEYAVRQGPAALHYAPSEQAIAGGSLRDVPARVGQWKNALLDLSLRNRLINYGEKAGYPLAVPQPSIAAFEDMVNQGTSISLVPSDRIPTVDGTRGIRYGQELSEAMRAAQLAERKQVYVGVTEAAYATRLRALAYKARTIREETGANNLYLAFGMLRWRSGDRDLRSPLVLVPVSLEAAGAGRTFRITLDESGESTPNYCLLEKLRLSFGLDIPGLANPARDESGIDLAAAFSATRRALAAAQLPFTVDDTVDLAILQFAKYRLWKDLDDNWGELAKNPLVNHLIYTPTAEFSDPAPGPRNVDLDALNNAVPVAADSSQLEAVAEAEAGRTFVLEGPPGTGKSQTITNLLAHALAKGKRVLFVAEKRAALDVVKDRLDAVGIGPFALDLHDKGARPAAVRAQIRAAIDAIARPDEAALSANRATADSSRGALKRYAQRLHEPNTAGLSLYAARAQLLALADDAEPLEIPQALVASRAAGDFDRLRELMRTLPETADFAHPSRLHPWGFVPSSVQDSVAVHAAAREFDAALNAIPTEGETQTLLATASSPEHLEQWAVVANAPRFSVEALDAVHGRALTGEIGAIQALLESTGGARGWFSAVGPEVLLSDVHEVYRAAVAADASGFFGRRKRQRAALAGFGSALRVDPRTYPARDVTPLVAEVVGAAEEIGSLRAQLISLPLPLVSATWTPYSEEGTDSVKTSLAWAVWLGDALSGGGADFKVGLRRNYAASSPAPDLAGALTRLAAAWRGLAAAIGDIDRRDGVSGALAAWAPPGELFAVWRSTSGGRNLATSEPVTLDRWLAFLQHLEPLLGFGMSRAHNSLLTGAVPADLAYLALERGIADASIREREESQAMVSFDVAAHNRAITRFTTSAASIRAELPRAIPAEILAQRRIDPAFDGGMMGELKRQLGRQRGGMAVRTLFEHYGDLITQIAPCVLMSPESVARFFPARAAMFDIVVFDEASQIRVADAVGAMGRAGSVVVVGDSKQMPPSSFAEVSSDIESDPSSFADQVLDEESILTECVQARVSRKWLSWHYRSQDEALISFSNQAYYDSRLSSFPAPWPHAGDNARADHGISLVRVDGRFNRSGRGKDLRTNAAEAGAIVREVTRRFEMSVESTPSVGIITFNSQQRTYIEALLRESPNERIAQALDERDGLFVKNLENVQGDERDTILFSVAFSANDRGVVPLNFGPLSRAGGERRLNVAITRARRQVVLFASFDPSDLRAEETSSVGIKHLRAYLEMAASGVESSDGMSRERLVDRHRDEIAAALRSRGFAVRTDIGLSDFRVDISIADAAEPALPLVAVLLDGESWRARRTVADRDGLPVDVLKGLMGWPAVERVWLPEWMQQREETIDRLGAAVEAAKAGVEAAEPVAAEATGVATLPVSSEDDAELGIRDVADIGVGAAPEVPAPVRSAPAPTSGVASAELRHPRVRQFTPWTPSRSGSIETLDDLPDRRAVDQVRTVITKIVESEGPIHRERLARLAAESFGLSRVAPARMDAILRCLSSDHVRAADKSCAWPSGIEPDRWRDVRVSSPGDGRPLEHVPLDEIANAMAVAAELGGGMAEGELKRQALNMFGGKRVTAGIDAILTAALTRAVKTGRIARDERGVFLAQG*