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berkeley_reactor_200306_planktonic_scaffold_4342_15

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(18870..22046)

Top 3 Functional Annotations

Value Algorithm Source
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HE51_ARTCA similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 1053.0
  • Bit_score: 1580
  • Evalue 0.0
DEAD/DEAH box helicase {ECO:0000313|EMBL:KIC58739.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 1058.0
  • Bit_score: 2052
  • Evalue 0.0
HsdR family type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 1053.0
  • Bit_score: 1580
  • Evalue 0.0

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3177
ATGACCGCGCTACCTGAAGCTGCGTGGGAGCAGGACGCTCTCGAAACGCTCGCCGAGCCGTTGGGGTGGCGACCGGCGAAGGGCGATGAAGTCGCACCCGGGAGCGGTGAGCGCGACACGTGGGACGACCTGCTGATCCGTCCGCGTCTGCTCGACGCGCTGCGGCGACTCAACCCCGGAGTGCCTGCCGAGTACTTGCAGCAAGCGGTCGCGGAGATCGCGGCGCCGAAGTCGCAGGATGCGATCACCGAGAACCACCGCATCCATCAGTACCTCGTCAGCGGATATCCGTTGAGCTACATCGACACCGACGGCACCGAACAGAATCCGCGGCTCCGACTGCTCGGCACCGACCCGTCCGACAATGACTGGCTCGCCGTCAACCAGCTGACGCTCCGGCGCGGTGACCTCCACCGTCGACTCGACATCGTGCTGTTCGTGAACGGGATGCCGCTCGTCATCGTCGAGCTGAAGCGTGCTGGCTCGGCATCCACCGGCGTCGCCCCGGCGCATGCACAGCTGCAGACGTATCTGCGCGAGTTCCCGATGGTGTTCCGTTTCTGCATACTCACCCTCGCGACCGACGGCATCGATGCGAAGTACGGCACGCCCTTCACGCCGCTGAACCACTTCGCGCCCTGGAACGTTGACGATGACGGCAAACCGCTCGCGCAGCCGCGGATCGAGGACGGTGTGTCGGTCGAGCCGATCGATGACGCTCTCAACGGCCTGTTCAATCAGGAGCGGTTCCTCCAGCTCGTGCGCAACTTCACGGCGTTCGACGAGAACGCCGACGGCCTCACGAAGCGCATCGCGAAGCCGCACCAGTACTTCGCGGTGACGAAGGCGGTCGGCAGCACCGTGCAGGCCGTCGAGACCAACGGCAAGGCCGGTGTCGTCTGGCACACGCAGGGCTCGGGCAAGTCAATGGAGATGGAGCTGTACGCGAACCTCGTATCGCGGCATCCGAAACTCAAGAACCCCACCGTCGTCGTCGTCACCGACCGCACCGAGCTCGACGGGCAGCTGTTCCAGACGTTCGACCAGAGTCTGCTGCTCGCCGAGAAGCCCGTCCAGGTGCGCGAACGCGCCCAACTGCGCGACGAGCTGCGCAACCGAGTCACCGGCGGCATCTACTTCACGACGCTGCAGAAGTTCGGGCTCACCGAGGCAGAGAAAGCGTCTGGCACGCAGCATCCCCTGCTCACCGACCGGCGCAACGTGATCGTCGTCGTCGATGAAGCCCACCGCAGCCACTACGACGACCTCGACGGCTACGCCCGTCACCTGCGTGATGCGTTGCCGAACGCGACGCTCATCGCCTTCACCGGTACGCCGATCTCCTTCGCGGAGCGCGATACGCGCGCAGTGTTCGGCGACTACATCGACATCTACGACCTCACGCGGGCCGTCGGCGACGGCGCGACCGTCCCTGTCTACTTCGAGCCGCGGCTCATCAAGGTGTCGTTCGCCGAAGGTGCGAGCGAGGACGATATCGACCGTGCCGCCGACGAATACACCGTGGGGCTGGATGACACAGAGCGGGCGCGGCTCGAGGCATCCGTCGCCGTCGTCAACGCCGTCTACGGCGCGCCGGAGCGCATCGAGACGCTCGCGGCCGACCTCGTGCGGCACTGGGAAGAGCGGCGGGAGCGGATGAAGCCTTTCCTCGCCTCCCCTGGCAAAGCCCTCATCGTTGGCGGCACGCGTGAGATCTGCGCGCGACTGTATGCGGAGATCGTGCGTCTGCGGCCCGACTGGCACTCCGACGCGCTGGATTCCGGCAAGATCAAGGTCGTCTACTCGGGGTCCGCATCCGACCAGCCGCCGGTCAGCGACCACGTGCGCCGAGACTCCGAGAACAAGGCGATCAAGGCGCGGCTGAAGGATGCCGACGACGAGCTCGAACTGGTCATCGTCAAGGACATGATGCTGACCGGCTTCGACGCTCCGCCGCTGCACACGCTCTACCTCGACCGACCCCTCAAGGGTGCCCTGTTGATGCAGACCCTCGCGCGGGTGAACCGCACGTTCCGAGGAAAGGAGGACGGGCTGCTCGTCGCGTACGCGCCGCTCGCCGACAACCTCGCGAACGCTCTTGCGGAGTACACGACATCGGATCAGGAGAACAAGCCCGTCGGCCGAGATGTCGACGAAGCGGTTGCTATTGCGACTGAGCTCGTTGCTGAGATCCGCGAGATGCTCGCCGACTGCGATTGGCGAGCGATCGTCGCGCGCGGCGGCTCTCGCGCCTGGCGAACGGCAGCAACGACCGCAACCAATTTCCTGCGAGACGCCGCGAATCCGCTGAACGACCCTGAGCTCGGCATCGACCGGCTGTCGGTGCGATACCGCACCGCGACGGGTCAGCTGGCTCGGGCGTGGGCACTCGCGTCCGGCCGTGACGGACTTGCTGAACTGCACGAAGAGATCGCCTTCTACGAAGAGGTTCGCGTCTGGATGGCGAAGTTCGACGCCGCTGAACGGCAGGCCCGCGACGAACCGATTCCCGAGGAGATCTCGCGCCTCCTCGGATCGCTCGTCGCCGAGTCCATCGCTCCCGGGGAAGTTCTCGACATCTATGACGCGGCCGGGCTTCCGCGGCTGGCGCTCGACAACCTCGGTCCTGACTTCCTCGCCAAGGCGCAGGCGGCGCCGAACGCGCATCTCGCGATCGAAGCGCTGCGCAAGTCGCTGACGGATGCCGGCGCGAGCGCGACACGCGGCAACCTTGTTCGCCAACGGGCGTTCTCGGAACGGATCGCCGAGATCATGAACCGCTACACGAACCAGCAACTGACCTCCGCTGAGGTGATCGCGGAGTTGGTGGAGCTCGCGAAGGAGGTCGCCGCTGAAGCGTCGCGCGGCACCCACTTCTCCCCACCGCTCTCTAGCGACGAACTGGCGTTCTACGACGCCGTCGCCACGAACGAGTCGGCGATCGATGTGCAGGGTGAGGACGTGCTCGCGCAGATCGCCCGGGAGCTCGTCGCCGTGATGCGTCGTGATGTCCGCACCGACTGGACCGTGCGCGATGACGTGCGCGCGAAGCTGCGGTCGTCGATCAAGCGGCTGCTCGTGAAGTACAAGTACCCGCCGGACAAGCAGCCCGAGGCTATCAAGCTCGTCATGGACCAGATGGAATCGATGGCTCCGCGGTATGCGGGGGAGCGGTAG
PROTEIN sequence
Length: 1059
MTALPEAAWEQDALETLAEPLGWRPAKGDEVAPGSGERDTWDDLLIRPRLLDALRRLNPGVPAEYLQQAVAEIAAPKSQDAITENHRIHQYLVSGYPLSYIDTDGTEQNPRLRLLGTDPSDNDWLAVNQLTLRRGDLHRRLDIVLFVNGMPLVIVELKRAGSASTGVAPAHAQLQTYLREFPMVFRFCILTLATDGIDAKYGTPFTPLNHFAPWNVDDDGKPLAQPRIEDGVSVEPIDDALNGLFNQERFLQLVRNFTAFDENADGLTKRIAKPHQYFAVTKAVGSTVQAVETNGKAGVVWHTQGSGKSMEMELYANLVSRHPKLKNPTVVVVTDRTELDGQLFQTFDQSLLLAEKPVQVRERAQLRDELRNRVTGGIYFTTLQKFGLTEAEKASGTQHPLLTDRRNVIVVVDEAHRSHYDDLDGYARHLRDALPNATLIAFTGTPISFAERDTRAVFGDYIDIYDLTRAVGDGATVPVYFEPRLIKVSFAEGASEDDIDRAADEYTVGLDDTERARLEASVAVVNAVYGAPERIETLAADLVRHWEERRERMKPFLASPGKALIVGGTREICARLYAEIVRLRPDWHSDALDSGKIKVVYSGSASDQPPVSDHVRRDSENKAIKARLKDADDELELVIVKDMMLTGFDAPPLHTLYLDRPLKGALLMQTLARVNRTFRGKEDGLLVAYAPLADNLANALAEYTTSDQENKPVGRDVDEAVAIATELVAEIREMLADCDWRAIVARGGSRAWRTAATTATNFLRDAANPLNDPELGIDRLSVRYRTATGQLARAWALASGRDGLAELHEEIAFYEEVRVWMAKFDAAERQARDEPIPEEISRLLGSLVAESIAPGEVLDIYDAAGLPRLALDNLGPDFLAKAQAAPNAHLAIEALRKSLTDAGASATRGNLVRQRAFSERIAEIMNRYTNQQLTSAEVIAELVELAKEVAAEASRGTHFSPPLSSDELAFYDAVATNESAIDVQGEDVLAQIARELVAVMRRDVRTDWTVRDDVRAKLRSSIKRLLVKYKYPPDKQPEAIKLVMDQMESMAPRYAGER*