ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_286276_179

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 200661..201020

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix HxlR type n=2 Tax=Microbacterium RepID=H8E696_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 118.0
  • Bit_score: 214
  • Evalue 5.10e-53
Transcriptional regulator {ECO:0000313|EMBL:EXJ52261.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 118.0
  • Bit_score: 216
  • Evalue 1.10e-53
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 118.0
  • Bit_score: 178
  • Evalue 6.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGTTAGTCTTGCGGAAATACGCACCCAGAACGATCAGGCGTTCACGGAGAACTGTCCGACCCGGGTGGTCCTCGACCACGTCATGAGCAAGTGGGGCGTCCTCGTGCTGCTGGCGCTCAGCGAGGGCACCGCCCGCTGGGGCGAGCTGCGGCGCGCCGTGGACGGCATCAGCGAGAAGATGCTGGCGTCGACGCTGCGAACCCTCGAGGCCGACGGGCTCGTCGTGCGCACCGCCTACCCGGAGGTCCCGCCCCGCGTCGAGTACGCCCTCACCGCGCGCGGCGACCAGCTCATGGAGCGCGTCCGGCCGCTAATGAGCTGGATCGCCGACAACGCCGGCGAGATCGTCGGTCGCTGA
PROTEIN sequence
Length: 120
MVSLAEIRTQNDQAFTENCPTRVVLDHVMSKWGVLVLLALSEGTARWGELRRAVDGISEKMLASTLRTLEADGLVVRTAYPEVPPRVEYALTARGDQLMERVRPLMSWIADNAGEIVGR*