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berkeley_reactor_200306_planktonic_scaffold_286276

Search features with annotation key words

Displaying items 181-210 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_286276_177
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

198245..199672
DNA (1428bp) protein (476aa)
Dihydrolipoamide dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE93_9MICO
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:EPD84995.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component
berkeley_reactor_200306_planktonic_scaffold_286276_178
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(199701..200561)
DNA (861bp) protein (287aa)
3-beta hydroxysteroid dehydrogenase/isomerase n=2 Tax=Microbacterium RepID=H8E697_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84996.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
nucleoside-diphosphate-sugar epimerase
berkeley_reactor_200306_planktonic_scaffold_286276_179
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

200661..201020
DNA (360bp) protein (120aa)
Helix-turn-helix HxlR type n=2 Tax=Microbacterium RepID=H8E696_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ52261.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_180
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(201037..201672)
DNA (636bp) protein (212aa)
NADP oxidoreductase coenzyme F420-dependent n=2 Tax=Microbacterium RepID=H8E695_9MICO
NADP oxidoreductase {ECO:0000313|EMBL:EXJ52262.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dinucleotide-binding enzyme
berkeley_reactor_200306_planktonic_scaffold_286276_181
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

201766..202548
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00035F8CA6
Phosphonomutase {ECO:0000313|EMBL:KIC59958.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_182
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

202587..202967
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8P6_9MICO
Membrane protein {ECO:0000313|EMBL:KIC59959.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_183
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

202995..204296
DNA (1302bp) protein (434aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
M18 family aminopeptidase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E693_9MICO
aspartyl aminopeptidase
berkeley_reactor_200306_planktonic_scaffold_286276_184
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

204444..205754
DNA (1311bp) protein (437aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E691_9MICO
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EIC07688.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
arabinose efflux permease family protein
berkeley_reactor_200306_planktonic_scaffold_286276_185
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

205773..206609
DNA (837bp) protein (279aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E689_9MICO
Short-chain dehydrogenase {ECO:0000313|EMBL:EXJ52267.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dehydrogenase with different specificities
berkeley_reactor_200306_planktonic_scaffold_286276_186
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(206681..207715)
DNA (1035bp) protein (345aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase n=2 Tax=Microbacterium RepID=H8E688_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85005.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
berkeley_reactor_200306_planktonic_scaffold_286276_187
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

207779..208423
DNA (645bp) protein (215aa)
NAD-dependent epimerase/dehydratase n=2 Tax=Microbacterium RepID=H8E687_9MICO
NAD-dependent dehydratase {ECO:0000313|EMBL:EXJ52269.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NAD-dependent dehydratase
berkeley_reactor_200306_planktonic_scaffold_286276_188
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

208479..208658
DNA (180bp) protein (60aa)
Flagellar biosynthesis pathway, component FlhA n=2 Tax=Microbacterium RepID=H8E686_9MICO
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KIC59966.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
flagellar biosynthesis pathway, component FlhA
berkeley_reactor_200306_planktonic_scaffold_286276_189
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

208738..209292
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E685_9MICO
Nuclease {ECO:0000313|EMBL:KIC60298.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_190
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

209400..210002
DNA (603bp) protein (201aa)
Transcriptional regulator PadR family protein n=2 Tax=Microbacterium RepID=H8E684_9MICO
PadR family transcriptional regulator {ECO:0000313|EMBL:EXJ52272.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_191
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

210008..211693
DNA (1686bp) protein (562aa)
ABC-1 domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E683_9MICO
ABC transporter {ECO:0000313|EMBL:EXJ52273.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_192
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(211704..212597)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A913_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85011.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_193
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

212754..213377
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A797_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85013.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
berkeley_reactor_200306_planktonic_scaffold_286276_trna_5
unknown

Not on your lists

213425..213513
DNA (89bp)
transferRNA Ser
berkeley_reactor_200306_planktonic_scaffold_286276_194
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

213726..215135
DNA (1410bp) protein (470aa)
Sodium:dicarboxylate symporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E675_9MICO
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EIC07672.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sodium:dicarboxylate symporter
berkeley_reactor_200306_planktonic_scaffold_286276_195
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(215172..217406)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8R0_9MICO
Transglutaminase {ECO:0000313|EMBL:KIC59984.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transglutaminase-like enzyme, cysteine protease
berkeley_reactor_200306_planktonic_scaffold_286276_196
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(217393..218667)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E673_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52377.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_197
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(218676..219656)
DNA (981bp) protein (327aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E672_9MICO
ATPase {ECO:0000313|EMBL:KIC59986.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
MoxR-like ATPase
berkeley_reactor_200306_planktonic_scaffold_286276_198
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

219939..222089
DNA (2151bp) protein (717aa)
Phosphate acetyltransferase {ECO:0000256|PIRNR:PIRNR006107}; EC=2.3.1.8 {ECO:0000256|PIRNR:PIRNR006107};; Phosphotransacetylase {ECO:0000256|PIRNR:PIRNR006107}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Phosphate acetyltransferase n=2 Tax=Bacteria RepID=H8E670_9MICO
phosphotransacetylase
berkeley_reactor_200306_planktonic_scaffold_286276_199
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

222086..223276
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Acetate kinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E669_9MICO
ackA; acetate kinase
berkeley_reactor_200306_planktonic_scaffold_286276_200
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

223344..224072
DNA (729bp) protein (243aa)
Beta-phosphoglucomutase family hydrolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E668_9MICO
Beta-phosphoglucomutase family hydrolase {ECO:0000313|EMBL:EIC07665.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phosphatase/phosphohexomutase
berkeley_reactor_200306_planktonic_scaffold_286276_201
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

224105..226648
DNA (2544bp) protein (848aa)
Glycoside hydrolase family 65 central catalytic n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E667_9MICO
Kojibiose phosphorylase {ECO:0000313|EMBL:KIC59991.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
trehalose and maltose hydrolase
berkeley_reactor_200306_planktonic_scaffold_286276_202
Cryptococcus gattii, Filobasidiella, Tremellales, Tremellomycetes, Basidiomycota, Fungi

Not on your lists

comp(226581..227393)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Cryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) RepID=E6R785_CRYGW
Unplaced genomic scaffold supercont1.169, whole genome shotgun sequence {ECO:0000313|EMBL:KIR78399.1}; TaxID=1296103 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Tremellaceae; Filobasidiella; Filobasidiella/Cryptococcus neoformans species complex.;" source="Cryptococcus gattii EJB2.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_203
unknown

Not on your lists

227821..227961
DNA (141bp) protein (47aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_286276_204
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(228255..228965)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A925_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85026.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_205
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(228958..230445)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASB7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85027.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
amino acid transporters
Displaying items 181-210 of 225 in total

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