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berkeley_reactor_200306_planktonic_scaffold_286276_190

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 209400..210002

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator PadR family protein n=2 Tax=Microbacterium RepID=H8E684_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 199.0
  • Bit_score: 327
  • Evalue 9.10e-87
PadR family transcriptional regulator {ECO:0000313|EMBL:EXJ52272.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 199.0
  • Bit_score: 328
  • Evalue 3.30e-87
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 202.0
  • Bit_score: 236
  • Evalue 4.60e-60

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGAACGACTCATTCGCAGGTGCAGACTTCGGCGGACGCCGGCCGGGAGCCCACGGCTTCGGCGGGCGCGGGTTCGGCGCGGGAGCATTCGGCGGAGGTCCGGGCGGCATGTGGGACGCGATGGAGAACCTCCGCGCGTCGTTCGAGCAGCGCACCGGCCCGCGCATGGGACGCGGGGACGTGCGCGCGGCGGTGCTCGCGCTGCTCGCCGAACAGCCCATGCACGGCTACCAGATCATCCAGGAGATCGAGCAGCGCAGCGGCGGGGCGTGGAAGCCCAGTGCGGGCTCGGTGTACCCGACCCTGCAGATGCTCGCCGATGAGGGCCTGATCGCCGCCGAGGAGGCGAACGGGCGCAAGACCTACAGCCTCACCGACGCGGGTCGCGCCGAGGCCGACGCGGCCGCGGAGCGGACGGCGCCGTGGGAGACGCCGGGCCAGCGCGACGGCGGGCGCATGAGCGCGCTGCCCAAGGCCGGGTTCGAGCTCGCGCAGGCCGTCGCCCAGGTCGGACGCACCGGCACGCCCGCGCAGGTGCAGCAGGCCGTGGATGTGCTCGACGAGGCGCGTCGCCGCATCTACGCCCTCCTCGCGCAGGACTGA
PROTEIN sequence
Length: 201
MNDSFAGADFGGRRPGAHGFGGRGFGAGAFGGGPGGMWDAMENLRASFEQRTGPRMGRGDVRAAVLALLAEQPMHGYQIIQEIEQRSGGAWKPSAGSVYPTLQMLADEGLIAAEEANGRKTYSLTDAGRAEADAAAERTAPWETPGQRDGGRMSALPKAGFELAQAVAQVGRTGTPAQVQQAVDVLDEARRRIYALLAQD*