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scn_reactorb_scaffold_20309_32

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(37666..38736)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8Z0_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 350.0
  • Bit_score: 307
  • Evalue 1.00e-80
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 350.0
  • Bit_score: 307
  • Evalue 2.90e-81
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU37313.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 350.0
  • Bit_score: 307
  • Evalue 1.40e-80

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGATGCCCGCCGCCCCGCCCGCCACCCCGCCCGGTGACGCCGCCGCGCGCCAGCGCCAGGCGTTGGTGCGCTGGTTCATGCGCCGCCACGGCGCGCCCGCCAGTGCCCCGTGGAGCGCCGCGGACGAGCAGGCCTTCCAGCAATGGCTGGGCAGCCCGGCCAACCGGCAGGCCTACGCGCGCTGGCAGGCCGACTGGGCGCTGATCGACGCCATGCCACCTGCCGCCGCCGACCGCCTGCGCGCCATGGCCGAGGCCGACCTGGCGGCGCAGCGCGCCGCCGCCGCGCCACCGGCCCCGGGCCGCAGGCAATGGCTGGGCCAGGGGCTGGCCCTGGCGGGCGTGGCGGGCATGGTGCTGGGCAGCGGCTGGCTCGGCTGGCGCCACCTGCAGGCCCAGCCCGTGTTCGCGCAGGCGTTCAGCACCCGCCAGGGCCAGCAGATCGCGGCCACGCTGCCCGACGGCTCCACCATCCGCCTGGACACCGCCACCACGCTGCAGGTGGCACTGTTCCGCGGCCGGCGCGAGGTGCGCCTGGCGCAGGGGCAGGCCTTCTTCGCGGTGGCTGCCGACGCGCGGCGGCCCTTTTCCGTCATGGCGGGCGGGGCCGTGGTCACCGTGCTGGGCACGCGCTTCGCGGTGCGCTACACGCCTGGCGTGCCGGGCCGCGAGGGTGTGGAGGTGGCAGTGGAGGAAGGCCGCGTGCGCGTGGCGCGCGGCGAACCCGGCGGCGGCGCGGCGCAGCCGTTCGAGCTGGCCGCGGGCCAGACGCTGCGGCTGCCGCCCGGCGGCGCCGACCCGGTGCCCGGCGCCGTGCCCGCCGCGGGCGTGGCGCCGTGGCGCAGCATGCCCCTGAGCTTCAGCGACGTGCCGCTGCGCGAGGCCGTGGCCGAGATGGAGCGCTACGCCAGCCTGGGCATCGCCGCCATCGACCCGGCCGTGGCCGGCCTGCGGCTGAGCGGCACCTTCGACCCGCGCGACCCCGAGGCCACCCGGCGCCTGCTGGCGCGCGCCCTGCCCATCCGGCTGGAGGACAGCGCGCAGGGGGTGCACGTGCGGCCGGTGCGCTGA
PROTEIN sequence
Length: 357
MMPAAPPATPPGDAAARQRQALVRWFMRRHGAPASAPWSAADEQAFQQWLGSPANRQAYARWQADWALIDAMPPAAADRLRAMAEADLAAQRAAAAPPAPGRRQWLGQGLALAGVAGMVLGSGWLGWRHLQAQPVFAQAFSTRQGQQIAATLPDGSTIRLDTATTLQVALFRGRREVRLAQGQAFFAVAADARRPFSVMAGGAVVTVLGTRFAVRYTPGVPGREGVEVAVEEGRVRVARGEPGGGAAQPFELAAGQTLRLPPGGADPVPGAVPAAGVAPWRSMPLSFSDVPLREAVAEMERYASLGIAAIDPAVAGLRLSGTFDPRDPEATRRLLARALPIRLEDSAQGVHVRPVR*