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scn_reactorb_scaffold_55290

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_55290_1
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..161
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2VGU3_9ENTE
Sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJF27271.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase
scn_reactorb_scaffold_55290_2
unknown

Not on your lists

comp(176..1042)
DNA (867bp) protein (289aa)

This feature has no annotations

scn_reactorb_scaffold_55290_3
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

comp(1032..1994)
DNA (963bp) protein (321aa)
Putative uncharacterized protein DDB_G0289963 n=1 Tax=Dictyostelium discoideum RepID=Y6146_DICDI
Putative uncharacterized protein DDB_G0289963; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
scn_reactorb_scaffold_55290_4
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2231..2986)
DNA (756bp) protein (252aa)
RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEA9_ALKOO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
FliA/WhiG family RNA polymerase sigma factor
scn_reactorb_scaffold_55290_5
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3089..3457)
DNA (369bp) protein (123aa)
Serine-protein kinase rsbW n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AS19_9CLOT
Histidine kinase {ECO:0000313|EMBL:KJF26391.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
anti-sigma B factor
scn_reactorb_scaffold_55290_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3467..3790)
DNA (324bp) protein (108aa)
Anti-sigma factor antagonist n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CL67_9CLOT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
anti-sigma-factor antagonist
scn_reactorb_scaffold_55290_7
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3922..6450)
DNA (2529bp) protein (843aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAV0_9CLOT
scn_reactorb_scaffold_55290_8
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6463..8373)
DNA (1911bp) protein (637aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRW1_9CLOT
scn_reactorb_scaffold_55290_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8361..9494)
DNA (1134bp) protein (378aa)
DNA replication and repair protein RecF n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AS13_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
recF; DNA replication and repair protein RecF
scn_reactorb_scaffold_55290_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9609..9824)
DNA (216bp) protein (72aa)
S4 domain protein YaaA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U829_9CLOT
S4 domain protein YaaA {ECO:0000313|EMBL:EKQ57787.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
yaaA; S4 domain protein YaaA
scn_reactorb_scaffold_55290_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9859..10896)
DNA (1038bp) protein (346aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAU4_9CLOT
scn_reactorb_scaffold_55290_12
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11464..12798)
DNA (1335bp) protein (445aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUD5_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
chromosomal replication initiator protein DnaA
scn_reactorb_scaffold_55290_13
Peptostreptococcus stomatis, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13945..14271
DNA (327bp) protein (109aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=596315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus stomatis DSM 17678.;"
Ribonuclease P protein component n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E1M2_9FIRM
rnpA; ribonuclease P
scn_reactorb_scaffold_55290_14
Eubacterium saphenum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14308..14568
DNA (261bp) protein (87aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H080_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=592031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium saphenum ATCC 49989.;"
hypothetical protein
scn_reactorb_scaffold_55290_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14581..15360
DNA (780bp) protein (260aa)
Inner membrane protein translocase component YidC, short form n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAT8_9CLOT
Inner membrane protein translocase component YidC, short form {ECO:0000313|EMBL:EOC99429.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
oxaA2; inner membrane protein OxaA
scn_reactorb_scaffold_55290_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15492..16133
DNA (642bp) protein (214aa)
Protein jag n=1 Tax=Clostridium ultunense Esp RepID=M1ZFJ8_9CLOT
Protein jag {ECO:0000313|EMBL:CCQ96933.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
putative RNA-binding protein
scn_reactorb_scaffold_55290_17
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16564..17442
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRI3_TEPAE
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDI40262.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
scn_reactorb_scaffold_55290_18
unknown

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17503..18717
DNA (1215bp) protein (405aa)

This feature has no annotations

scn_reactorb_scaffold_55290_19
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18901..19758
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z6D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11376.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
TraX protein
scn_reactorb_scaffold_55290_20
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20082..21455
DNA (1374bp) protein (458aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
mnmE; tRNA modification GTPase TrmE (EC:3.6.-.-)
tRNA modification GTPase MnmE n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQM7_9CLOT
scn_reactorb_scaffold_55290_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22427..24355
DNA (1929bp) protein (643aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AS00_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
scn_reactorb_scaffold_55290_22
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24409..25125
DNA (717bp) protein (239aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
gidB; 16S rRNA methyltransferase GidB (EC:2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium ultunense Esp RepID=M1ZE60_9CLOT
scn_reactorb_scaffold_55290_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25184..25975
DNA (792bp) protein (264aa)
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAT3_9CLOT
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J {ECO:0000313|EMBL:EOC99424.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
parB-like partition protein
scn_reactorb_scaffold_55290_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26085..26882
DNA (798bp) protein (266aa)
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG79577.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
cobyrinic acid a,c-diamide synthase
scn_reactorb_scaffold_55290_25
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27063..27911
DNA (849bp) protein (283aa)
ParB-like partition protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GR84_EUBLK
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ADO39526.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
scn_reactorb_scaffold_55290_26
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28399..28887
DNA (489bp) protein (163aa)
NADP-reducing hydrogenase subunit HndA n=1 Tax=Clostridium ultunense Esp RepID=M1ZDE7_9CLOT
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein
Tax=BJP_IG2103_Clostridiales_50_15
scn_reactorb_scaffold_55290_27
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

28921..29277
DNA (357bp) protein (119aa)
NADH dehydrogenase I subunit F protein {ECO:0000313|EMBL:ERJ11093.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ERJ11093.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
NADH dehydrogenase I subunit F protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E7B5_9BACT
ferredoxin
scn_reactorb_scaffold_55290_28
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29318..31108
DNA (1791bp) protein (597aa)
hydB; iron hydrogenase HydB (EC:1.6.5.3)
NAD-reducing hydrogenase subunit HoxF n=1 Tax=Caloramator australicus RC3 RepID=G0V416_9CLOT
NADH dehydrogenase {ECO:0000313|EMBL:KGG79559.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
scn_reactorb_scaffold_55290_29
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31127..31537
DNA (411bp) protein (137aa)
Hydrogenase n=1 Tax=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) RepID=B5Y704_COPPD
hydrogenase
Tax=BJP_IG2103_Clostridiales_50_15
scn_reactorb_scaffold_55290_30
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31527..32918
DNA (1392bp) protein (464aa)
Fe only hydrogenase 1 (EC:1.12.7.2)
Periplasmic [Fe] hydrogenase large subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQL8_9CLOT
Tax=BJP_IG2103_Clostridiales_50_15
Displaying items 1-30 of 32 in total

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