ggKbase home page

scn_reactorb_scaffold_77812

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_77812_1
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(242..769)
DNA (528bp) protein (176aa)
GCN5-related N-acetyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U4L3_ETHHY
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU26641.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
scn_reactorb_scaffold_77812_2
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1072..2313)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FNK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS70058.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
scn_reactorb_scaffold_77812_3
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2303..3184)
DNA (882bp) protein (294aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC-type multidrug transport system, ATPase component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS26830.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
scn_reactorb_scaffold_77812_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3259..3810)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KLJ6_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41325.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_77812_5
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3803..4264)
DNA (462bp) protein (154aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIT8_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EMS70116.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ECF subfamily RNA polymerase sigma-24 factor
scn_reactorb_scaffold_77812_6
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4378..5265)
DNA (888bp) protein (296aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI000305EB25
histidine kinase
scn_reactorb_scaffold_77812_7
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5391..6239)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037F30F8
Uncharacterized protein {ECO:0000313|EMBL:CDD06838.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
scn_reactorb_scaffold_77812_8
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6232..7146)
DNA (915bp) protein (305aa)
ABC transporter, ATP-binding protein n=4 Tax=Lachnospiraceae RepID=A5KKY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81660.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ABC transporter related protein
scn_reactorb_scaffold_77812_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7231..7887)
DNA (657bp) protein (219aa)
Regulatory protein VanR n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5R5_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:EFW06566.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transcriptional regulator
scn_reactorb_scaffold_77812_10
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8120..9043
DNA (924bp) protein (308aa)
arylacetamide deacetylase (EC:3.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BBK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61533.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
scn_reactorb_scaffold_77812_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9024..10343
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPW3_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ84898.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
scn_reactorb_scaffold_77812_12
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

10330..10986
DNA (657bp) protein (219aa)
hypothetical protein AcelC_02821 id=4491195 bin=GWF2_Clostridiales_38_85 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
scn_reactorb_scaffold_77812_13
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11099..12103)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70863.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
zraR1; transcriptional regulatory protein ZraR
scn_reactorb_scaffold_77812_14
unknown

Not on your lists

comp(12124..12468)
DNA (345bp) protein (115aa)

This feature has no annotations

scn_reactorb_scaffold_77812_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12730..13089
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97968.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
scn_reactorb_scaffold_77812_16
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13173..14459
DNA (1287bp) protein (429aa)
grdG2; sarcosine reductase complex component B subunit alpha (EC:1.21.4.3)
Sarcosine reductase complex component B subunit alpha {ECO:0000313|EMBL:AHM58242.1}; EC=1.21.4.3 {ECO:0000313|EMBL:AHM58242.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
Glycine/sarcosine/betaine reductase component B subunit alpha and beta n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C511_9CLOT
scn_reactorb_scaffold_77812_17
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14475..15524
DNA (1050bp) protein (350aa)
grdF2; sarcosine reductase complex component B subunit beta (EC:1.21.4.3)
Sarcosine reductase complex component B subunit beta {ECO:0000313|EMBL:AHM58241.1}; EC=1.21.4.3 {ECO:0000313|EMBL:AHM58241.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C510_9CLOT
scn_reactorb_scaffold_77812_18
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15552..15785
DNA (234bp) protein (78aa)
grdF2; sarcosine reductase complex component B subunit beta (EC:1.21.4.3)
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C509_9CLOT
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein {ECO:0000313|EMBL:EEG72777.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
scn_reactorb_scaffold_77812_19
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15859..17001
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IQW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB28191.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hypothetical protein
scn_reactorb_scaffold_77812_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17384..18268
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHL73485.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
XRE family transcriptional regulator
scn_reactorb_scaffold_77812_21
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18348..18953
DNA (606bp) protein (202aa)
Uncharacterized protein n=5 Tax=Clostridium botulinum RepID=A5I3Q0_CLOBH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24510.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
scn_reactorb_scaffold_77812_22
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19250..19903
DNA (654bp) protein (218aa)
phosphoglycerate mutase n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B72AF3
Uncharacterized protein {ECO:0000313|EMBL:KEZ85204.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
Phosphoglycerate mutase family 3
scn_reactorb_scaffold_77812_23
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20002..20892)
DNA (891bp) protein (297aa)
Predicted transcription regulatory protein n=2 Tax=Clostridium RepID=D8GK53_CLOLD
AraC family transcriptional regulator {ECO:0000313|EMBL:KEZ84964.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
transcriptional activator, AraC family
Displaying 23 items

View Taxonomy