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scn_reactorb_scaffold_29609

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_29609_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..389
DNA (387bp) protein (129aa)
Tetracycline resistance protein TetP n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAH5_CLOBU
Small GTP-binding domain protein {ECO:0000313|EMBL:KIE45688.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
tetP; tetracycline resistance protein
scn_reactorb_scaffold_29609_2
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

452..1129
DNA (678bp) protein (226aa)
UPF0173 metal-dependent hydrolase CLOHIR_02140 n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1X8_9FIRM
UPF0173 metal-dependent hydrolase CLOHIR_02140 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
beta-lactamase domain-containing protein
scn_reactorb_scaffold_29609_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1188..4397)
DNA (3210bp) protein (1070aa)
alpha-mannosidase (EC:3.2.1.24)
Glycosyl hydrolase family 38 protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DDV2_9FIRM
Glycosyl hydrolase family 38 protein {ECO:0000313|EMBL:ERI94523.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
scn_reactorb_scaffold_29609_4
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4691..5716
DNA (1026bp) protein (342aa)
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8)
Mannose-6-phosphate isomerase, type 1 {ECO:0000313|EMBL:CDZ23299.1}; EC=5.3.1.8 {ECO:0000313|EMBL:CDZ23299.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Mannose-6-phosphate isomerase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RNG0_9CLOT
scn_reactorb_scaffold_29609_5
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5792..6766
DNA (975bp) protein (325aa)
glcK; glucokinase (EC:2.7.1.2)
Rfamily protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHU8_CLOPA
Putative ROK-family transcriptional regulator {ECO:0000313|EMBL:CDL90508.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
scn_reactorb_scaffold_29609_6
unknown

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6944..7234
DNA (291bp) protein (97aa)

This feature has no annotations

scn_reactorb_scaffold_29609_7
unknown

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7553..8269
DNA (717bp) protein (239aa)

This feature has no annotations

scn_reactorb_scaffold_29609_8
unknown

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comp(8266..8493)
DNA (228bp) protein (76aa)

This feature has no annotations

scn_reactorb_scaffold_29609_9
unknown

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comp(8877..9128)
DNA (252bp) protein (84aa)

This feature has no annotations

scn_reactorb_scaffold_29609_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9426..9959
DNA (534bp) protein (178aa)
Sigma-70, region 4 family protein n=1 Tax=Clostridium difficile CD69 RepID=T3ACM2_CLODI
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KIE48177.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RNA polymerase sigma factor, sigma-70 family
scn_reactorb_scaffold_29609_11
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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10424..11512
DNA (1089bp) protein (363aa)
HTH domain protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VEN1_9FUSO
HTH domain protein {ECO:0000313|EMBL:ERT69604.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
kinase, PfkB family
scn_reactorb_scaffold_29609_12
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

11558..12484
DNA (927bp) protein (309aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
Indigoidine synthase A-like protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VDI4_9FUSO
hypothetical protein
scn_reactorb_scaffold_29609_13
BJP_IG2069_Synergistales_47_25, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

12660..14402
DNA (1743bp) protein (581aa)
C4-dicarboxylate anaerobic carrier n=2 Tax=Clostridium bolteae RepID=N9ZQS5_9CLOT
C4-dicarboxylate anaerobic carrier
Tax=BJP_IG2069_Synergistales_47_25
scn_reactorb_scaffold_29609_14
BJP_IG2069_Synergistales_47_25, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

14464..15651
DNA (1188bp) protein (396aa)
beta-aspartyl peptidase (EC:3.4.19.5)
Isoaspartyl dipeptidase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D1M8_9FIRM
Tax=BJP_IG2069_Synergistales_47_25
scn_reactorb_scaffold_29609_15
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15830..16192
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STU0_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55380.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
scn_reactorb_scaffold_29609_16
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16321..19422)
DNA (3102bp) protein (1034aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MXL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB87344.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ABC transporter permease
scn_reactorb_scaffold_29609_17
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19497..19841)
DNA (345bp) protein (115aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CD35_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA69411.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
macrolide ABC transporter ATP-binding protein
scn_reactorb_scaffold_29609_18
unknown

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comp(20442..20576)
DNA (135bp) protein (45aa)

This feature has no annotations

scn_reactorb_scaffold_29609_19
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20673..22331
DNA (1659bp) protein (553aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EOD01132.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EOD01132.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWV8_9CLOT
scn_reactorb_scaffold_29609_20
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

22353..22751
DNA (399bp) protein (133aa)
B12 binding domain of Methylmalonyl-CoA mutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CR33_9CLOT
cobalamin B12-binding domain-containing protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
scn_reactorb_scaffold_29609_21
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22813..23160
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI000381C77F
Uncharacterized protein {ECO:0000313|EMBL:CDX00016.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
hypothetical protein
scn_reactorb_scaffold_29609_22
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23255..24199
DNA (945bp) protein (315aa)
Putative periplasmic protein kinase ArgK n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFP6_9CLOT
Putative periplasmic protein kinase ArgK {ECO:0000313|EMBL:EOD01130.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
LAO/AO transport system ATPase
scn_reactorb_scaffold_29609_23
unknown

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24229..24459
DNA (231bp) protein (77aa)

This feature has no annotations

scn_reactorb_scaffold_29609_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24567..25814)
DNA (1248bp) protein (416aa)
transposase n=1 Tax=Clostridium tyrobutyricum RepID=UPI000313BE93
transposase IS116/IS110/IS902 family protein
Uncharacterized protein {ECO:0000313|EMBL:EGN47663.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
scn_reactorb_scaffold_29609_25
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26133..26540
DNA (408bp) protein (136aa)
Putative lyase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PXA1_CLOSD
yqjC; putative lyase
Putative lyase {ECO:0000313|EMBL:CBH21066.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
scn_reactorb_scaffold_29609_26
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26572..27183
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis EnGen0363 RepID=R3FK14_ENTFL
Fic/DOC family protein {ECO:0000313|EMBL:KFL63616.1}; TaxID=526980 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus ATCC 10876.;"
cell division protein Fic
scn_reactorb_scaffold_29609_27
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27359..27931
DNA (573bp) protein (191aa)
Type I restriction modification DNA specificity protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F6Y1_DESDL
Restriction endonuclease subunit M {ECO:0000313|EMBL:KGK87416.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
type I restriction modification DNA specificity protein
scn_reactorb_scaffold_29609_28
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27928..31137
DNA (3210bp) protein (1070aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F7L4_DESDL
HsdR family type I site-specific deoxyribonuclease
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AGA68948.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
scn_reactorb_scaffold_29609_29
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31182..32186
DNA (1005bp) protein (335aa)
Virulence protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WD69_DESOD
virulence protein
Virulence protein {ECO:0000313|EMBL:AET67554.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
scn_reactorb_scaffold_29609_30
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

32183..32437
DNA (255bp) protein (85aa)
putative restriction-modification enzyme type I S subunit (EC:3.1.21.3)
type I restriction endonuclease subunit S n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B7ACD2
Tax=BJP_IG2069_Anaerolineales_43_63
Displaying 30 items

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