ggKbase home page

scn_reactorb_scaffold_39895_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1760..2416)

Top 3 Functional Annotations

Value Algorithm Source
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 217.0
  • Bit_score: 289
  • Evalue 3.20e-75
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1) similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 215.0
  • Bit_score: 271
  • Evalue 1.40e-70
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXD6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 217.0
  • Bit_score: 289
  • Evalue 2.30e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 657
ATGAATAAATTGTCACCATCAATCCTGTCTGCTGATTTTTCCAGACTTGGAGAGGATATAAAAAAAATTGAAGCTGGGGGAGCAGATTATGTTCATATTGATGTTATGGACGGCAGCTTTGTTCCAAATATAACTCTTGGAGCACCTATTGTAAAATCTATTAGAAAGATTACGGACTTAACCTTTGATGTGCATTTGATGATAAATAATCCGGATTTGCATTTAGAGGATTTTTATAATGCTGGAGCAGATATTATAACAGTACATCAAGAGGCTTGTGTGCACTTACACAGAACTATTCAAAAGATAAAATCCTTTGGATTAAAGGCAGGGGTTTCTTTAAATCCGGCTACACCGATTTGTACAATAAAGGATATAATTGAGGATGTGGACATGATACTTCTTATGTCTGTAAATCCTGGCTTTGGAGGACAAAGCCTTATATATAATGTTAAAGAAAAATTCTTAGATTTAAAGGAATTAATGTATAAAAAAAATATAACAAGGGATATCGAGATTGACGGTGGGGTAACATTGGATAATCTTAGTGAGGTTTTAAGCTGGGGAGCAAATGTTATAGTAGCAGGCTCTGCTATATACAATGCAGATGATGTTATAAAAAGAACACAACAATTTAAAAGGATAATGCAGTCTTAA
PROTEIN sequence
Length: 219
MNKLSPSILSADFSRLGEDIKKIEAGGADYVHIDVMDGSFVPNITLGAPIVKSIRKITDLTFDVHLMINNPDLHLEDFYNAGADIITVHQEACVHLHRTIQKIKSFGLKAGVSLNPATPICTIKDIIEDVDMILLMSVNPGFGGQSLIYNVKEKFLDLKELMYKKNITRDIEIDGGVTLDNLSEVLSWGANVIVAGSAIYNADDVIKRTQQFKRIMQS*