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scn_reactorb_scaffold_39895_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 2756..3292

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF id=4206620 bin=GWF2_Clostridiales_36_10 species=Clostridium colicanis genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 171.0
  • Bit_score: 223
  • Evalue 1.30e-55
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 174.0
  • Bit_score: 107
  • Evalue 2.80e-21
Tax=GWF2_Clostridiales_36_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 171.0
  • Bit_score: 223
  • Evalue 1.80e-55

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Taxonomy

GWF2_Clostridiales_36_10_curated → Clostridiales → Bacteria

Sequences

DNA sequence
Length: 537
ATGCTCTTTAATGATATTAATAAAATTTGTGACAAGGCAATCATTGAATTTTCAGAAGGAAATCAAGGCTACCTTTCCACAATATACGATTGTATGGCAAGGACAATCTTTTCATTGGCCTATGCCATTTTAAAAAATTATCAAGATGCAGAGGATGTACTGCAAGATACTATGCTTCAAATATCAAAATACGCTTATACATATCAAAAGGGAAGCAGTGCAAAGGCGTGGATACTTTCTATGACAAGACATTTATCCATAGATATTTTAAGAAAAAGAAAAAACTCACTGCCATTTGATGATGAATTTTTAGAAAACAATATGCAAGTATCAGAGGATGAATATTCACATTTAGATGTGCATGAAATTCTCAATATGCTTGACGAAGAAGAACGGCAGATAATAGTATTTCGTTTATATTCAAAATTGCCATATAAGGAAATATCAAATATGATGAATATAAATGTTTCCTCACTGCATAAGAAATATCAGCGTGCCATAAAAAAGCTTAAAAATAATTACGATTGGAGGTCATAA
PROTEIN sequence
Length: 179
MLFNDINKICDKAIIEFSEGNQGYLSTIYDCMARTIFSLAYAILKNYQDAEDVLQDTMLQISKYAYTYQKGSSAKAWILSMTRHLSIDILRKRKNSLPFDDEFLENNMQVSEDEYSHLDVHEILNMLDEEERQIIVFRLYSKLPYKEISNMMNINVSSLHKKYQRAIKKLKNNYDWRS*