ggKbase home page

scn_reactorb_scaffold_40147_6

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 6556..6756

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=3 Tax=Lysinibacillus RepID=B1HV57_LYSSC similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 63.0
  • Bit_score: 107
  • Evalue 3.70e-21
cspB; cold shock protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 63.0
  • Bit_score: 107
  • Evalue 1.10e-21
Cold-shock protein {ECO:0000313|EMBL:AHN21526.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 63.0
  • Bit_score: 107
  • Evalue 5.20e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysinibacillus varians → Lysinibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 201
ATGAAAACAGGTTCAGTTAAATGGTTTGATTCTAAGAAGGGTTTTGGATTTATCTCATGTGATGACGGAAAGGATGTATTTGTACACTTTACTGCTATAACTTCAGATGGATTTAAGACATTAGAAGAAGGACAAAAAGTAAGCTTTGATATCATAGATGGTAACAAAGGACCTCAAGCAAGCAACGTTAAATTAGCATAA
PROTEIN sequence
Length: 67
MKTGSVKWFDSKKGFGFISCDDGKDVFVHFTAITSDGFKTLEEGQKVSFDIIDGNKGPQASNVKLA*