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scn_reactorb_scaffold_40147_7

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(6901..7959)

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein n=2 Tax=Eubacterium RepID=C0F079_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 281.0
  • Bit_score: 307
  • Evalue 1.30e-80
S1 RNA binding domain protein {ECO:0000313|EMBL:CDB19186.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 281.0
  • Bit_score: 307
  • Evalue 1.80e-80
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 278.0
  • Bit_score: 295
  • Evalue 1.50e-77

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Taxonomy

Eubacterium hallii CAG:12 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1059
ATGATTAAGCTTGGAGAAATGCAAACTTTAATAGTTGCAAGAGAAGTAGACTTTGGGATTTATCTGAGAGAGAACGAGGATGACAAACGAGAAAACGACATTTTGCTTCCTATTAAGCAGGTTCCGGAGGGAACAAAACAAGGTGATAAAATAGAAGTTTTTGTATATAGAGATTCTAGCGATAGAATGATAGCAACAACCAAAAGGCCAAAGCTGACAATTGGTGAGATAGGCTTTTTAAAAGTTGCTGAGATATCAAAAATAGGTGCGTTTATGAACTGGGGTTTAGAAAAGGACTTATTCTTGCCATACAAGGAGCAGGTTAGCGAAATTAGGGTTAACGGCGAATATATGGTAGGTATATACATAGACAAGTCACAAAGGCTTTGTGCAACAATGAATTTATACAATGTTTTAAAGACAGATTCACCATATAAGGTAAATGATAAGGTGGAAGGAACTGTATTCAGTCTTAGAAGAGGTCTTGGGGCTATGATAGCCGTAGATGGAAAATATCTTGGAATGATACATGAAAAAGAAATACTTAGGCCGCTGCATATCGGAGATAAGGTAGAGCTTAGAGTAAATCAGGTAAAAGAGGATGGAAAGCTTGGATTAAGTCTAAAGGATGCTCCAAGGATGCAAATTGATAAGGATGGAGAAAAAATTTATAACAAGCTTGTTAAAAACAAGGGATTTTTACCATTCAATGATGACAGCAATCCAGAAGATATTATAGAGACCTTTAATATGAGCAAATCTTCATTTAAAAAAGCCATAGGCAATTTGATGAAAAGGAGATTAATTATGATAAGTAAAAAAGGAATAGAGCTTTACGATGCAGAAAAGGATATGCCAAGAGGTGGTATGTCACAAAGGGGAGAAGAAAAATCTTCTAAAAAAGGAAGTGTCGGAGCGGCAGGACAAAGCAAATTTTCAAAAAAGGGAGCTAGTCCATTTAACAAACAGGAAAAGTCCTTCTCAAAGGGCTTCAATTCATCAAACAGACAGGACAAAACAGGAAACAAAAGACAATTTACCAGCCACAAAAAGGTATAA
PROTEIN sequence
Length: 353
MIKLGEMQTLIVAREVDFGIYLRENEDDKRENDILLPIKQVPEGTKQGDKIEVFVYRDSSDRMIATTKRPKLTIGEIGFLKVAEISKIGAFMNWGLEKDLFLPYKEQVSEIRVNGEYMVGIYIDKSQRLCATMNLYNVLKTDSPYKVNDKVEGTVFSLRRGLGAMIAVDGKYLGMIHEKEILRPLHIGDKVELRVNQVKEDGKLGLSLKDAPRMQIDKDGEKIYNKLVKNKGFLPFNDDSNPEDIIETFNMSKSSFKKAIGNLMKRRLIMISKKGIELYDAEKDMPRGGMSQRGEEKSSKKGSVGAAGQSKFSKKGASPFNKQEKSFSKGFNSSNRQDKTGNKRQFTSHKKV*