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scn_reactorb_scaffold_40147

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_40147_1
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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comp(452..1390)
DNA (939bp) protein (313aa)
Carbamate kinase id=1741332 bin=GWB2_Clostridiales_37_7 species=Thermanaerovibrio velox genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
carbamate kinase
Tax=GWB2_Clostridiales_37_7_curated
scn_reactorb_scaffold_40147_2
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1577..2569)
DNA (993bp) protein (331aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic id=1741335 bin=GWB2_Clostridiales_37_7 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Tax=BJP_IG2103_Clostridiales_50_15
scn_reactorb_scaffold_40147_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2725..3939)
DNA (1215bp) protein (405aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
arcA; Arginine deiminase (ADI) (Arginine dihydrolase) (AD) (EC:3.5.3.6)
Arginine deiminase n=2 Tax=Oscillibacter RepID=U2Q6H2_9FIRM
scn_reactorb_scaffold_40147_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4167..5150)
DNA (984bp) protein (328aa)
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUL7_9CLOT
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M {ECO:0000313|EMBL:EOD00337.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
cell envelope transcriptional attenuator family protein
scn_reactorb_scaffold_40147_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5306..6331)
DNA (1026bp) protein (342aa)
Cell envelope transcriptional attenuator family protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1Q6_CLOA9
cell envelope transcriptional attenuator family protein
Cell envelope transcriptional attenuator family protein {ECO:0000313|EMBL:AFS79389.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
scn_reactorb_scaffold_40147_6
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6556..6756
DNA (201bp) protein (67aa)
Cold shock protein n=3 Tax=Lysinibacillus RepID=B1HV57_LYSSC
cspB; cold shock protein
Cold-shock protein {ECO:0000313|EMBL:AHN21526.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
scn_reactorb_scaffold_40147_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6901..7959)
DNA (1059bp) protein (353aa)
S1 RNA binding domain protein n=2 Tax=Eubacterium RepID=C0F079_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:CDB19186.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
RNA-binding protein
scn_reactorb_scaffold_40147_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8062..10473)
DNA (2412bp) protein (804aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
Glucose-6-phosphate isomerase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K9A1_CLOPA
glucose-6-phosphate isomerase
scn_reactorb_scaffold_40147_9
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10674..11630)
DNA (957bp) protein (319aa)
Putative gluconeogenesis factor n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B278_CLOA9
hypothetical protein
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
scn_reactorb_scaffold_40147_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11673..12527)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein L21TH_1529 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUT8_9CLOT
Nucleotide-binding protein L21TH_1529 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
scn_reactorb_scaffold_40147_11
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12606..13346)
DNA (741bp) protein (247aa)
PHP domain protein n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZWQ4_THEET
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:EGD51437.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus JW 200.;"
scn_reactorb_scaffold_40147_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13348..14106)
DNA (759bp) protein (253aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUW1_9CLOT
Displaying 12 items

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