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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_1

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2..178
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003824742
Uncharacterized protein {ECO:0000313|EMBL:KKT29040.1}; Flags: Fragment;; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_2

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247..1419
DNA (1173bp) protein (391aa)
Cell division protein ftsZ {ECO:0000313|EMBL:KKU29539.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
id=5227125 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_3

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comp(1472..2047)
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29538.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_4

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2155..2694
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29037.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein id=130444 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
methylase involved in ubiquinone/menaquinone biosynthesis
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_5
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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2691..3983
DNA (1293bp) protein (431aa)
sugar ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Extracellular solute-binding protein family 1 id=3736481 bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
sugar ABC transporter substrate-binding protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_6

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3980..4954
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FQ90_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU29535.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_7

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4978..5316
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKU29534.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_8

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5397..5744
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q061_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU29533.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_9
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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5771..6031
DNA (261bp) protein (87aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
transmembrane_regions id=5227144 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_10

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6028..6267
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29531.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
seg id=5803456 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_11

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comp(6778..7113)
DNA (336bp) protein (112aa)
Ribosome-binding factor A {ECO:0000313|EMBL:KKU29530.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_12
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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comp(7115..8629)
DNA (1515bp) protein (505aa)
Translation initiation factor IF-2 protein {ECO:0000313|EMBL:KKT59412.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=5803475 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
infB; translation initiation factor IF-2
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_13
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8649..9128)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037EBD53
Uncharacterized protein {ECO:0000313|EMBL:KKT59411.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_14

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9411..11336
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003773806
helicase
Uncharacterized protein {ECO:0000313|EMBL:KKU29527.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_15
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(11814..12209)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003722EA1
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_16

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12231..13178
DNA (948bp) protein (316aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=uncultured bacterium RepID=K2D8C9_9BACT
RNA-directed DNA polymerase {ECO:0000313|EMBL:KKT29026.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RNA-directed DNA polymerase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_17

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13574..14662
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C731_DESTA
Uncharacterized protein {ECO:0000313|EMBL:KKU29525.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_18
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(14759..15115)
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_19

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comp(15120..15737)
DNA (618bp) protein (206aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU29523.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RNA polymerase sigma factor
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_20

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comp(15800..16555)
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29522.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_21

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comp(16539..16802)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29521.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_22
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(16970..17389)
DNA (420bp) protein (140aa)
Vitamin K epoxide reductase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Vitamin K epoxide reductase id=2787854 bin=GWA1_Kazan_50_15 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
vitamin K epoxide reductase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_23
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(17352..18086)
DNA (735bp) protein (245aa)
DSBA oxidoreductase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
dsbG; protein-disulfide isomerase id=14423791 bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
Protein-disulfide isomerase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_24
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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comp(18096..18527)
DNA (432bp) protein (144aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
dUTPase n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037EE168
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut {ECO:0000313|EMBL:KKT59402.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_4
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_25
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(18534..19742)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000365719F
O-acetylhomoserine sulfhydrylase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
O-acetylhomoserine sulfhydrylase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_26
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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19853..21880
DNA (2028bp) protein (676aa)
mfd; Transcription-repair-coupling factor (EC:3.6.4.-) Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Transcription-repair coupling factor id=2824521 bin=GWC1_OD1_38_17 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
transcription-repair coupling factor
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_27
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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21893..21985
DNA (93bp) protein (31aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Displaying 27 items

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