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RifSed_csp1_16ft_1_scaffold_9973

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_1_scaffold_9973_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

3..218
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B67C28
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_16ft_1_scaffold_9973_2
unknown

Not on your lists

comp(228..743)
DNA (516bp) protein (172aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_9973_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

850..1377
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ08_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43245.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
RifSed_csp1_16ft_1_scaffold_9973_4
unknown

Not on your lists

1390..1572
DNA (183bp) protein (61aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_9973_5

Not on your lists

1659..2159
DNA (501bp) protein (167aa)
Ni-containing superoxide dismutase, putative n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CC21_ACAM1
Uncharacterized protein {ECO:0000313|EMBL:KKW13119.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
nickel-containing superoxide dismutase (NISOD)
RifSed_csp1_16ft_1_scaffold_9973_6
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

2162..2575
DNA (414bp) protein (138aa)
Signal peptidase I n=1 Tax=uncultured bacterium RepID=K2CD32_9BACT
signal peptidase I
Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
RifSed_csp1_16ft_1_scaffold_9973_7
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

2658..3134
DNA (477bp) protein (159aa)
Ferritin Dps family protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYI8_9ARCH
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
RifSed_csp1_16ft_1_scaffold_9973_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3184..3843
DNA (660bp) protein (220aa)
thermostable 8-oxoguanine DNA glycosylase id=18248969 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_9973_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4006..4869
DNA (864bp) protein (288aa)
A/G-specific adenine glycosylase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NN1_SYMTH
A/G-specific adenine glycosylase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_9973_10
unknown

Not on your lists

4952..5125
DNA (174bp) protein (58aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_9973_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5170..5760
DNA (591bp) protein (197aa)
trmY; tRNA (pseudouridine(54)-N(1))-methyltransferase (EC:2.1.1.257)
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=TRMY_UNCMA
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_9973_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5753..6829)
DNA (1077bp) protein (359aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AV4_SOLUE
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_9973_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

6918..8108
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037CA9D9
nicotinic acid phosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_16ft_1_scaffold_9973_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8150..8809
DNA (660bp) protein (220aa)
Methyltransferase type 11 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYY3_HALMD
methyltransferase type 11
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_9973_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8802..8990
DNA (189bp) protein (63aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_16ft_1_scaffold_9973_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

9030..9308
DNA (279bp) protein (93aa)
Thioredoxin n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P948_9ARCH
thioredoxin
Thioredoxin {ECO:0000313|EMBL:BAJ50459.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
RifSed_csp1_16ft_1_scaffold_9973_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9358..9741
DNA (384bp) protein (128aa)
Glycine cleavage system H protein id=5030728 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
glycine cleavage system H protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_9973_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9676..10113)
DNA (438bp) protein (146aa)
Putative aspartyl protease n=1 Tax=Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) RepID=H6QCN7_PYROT
putative aspartyl protease
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_9973_trna_1
unknown

Not on your lists

comp(10237..10310)
DNA (74bp)
transferRNA Arg
RifSed_csp1_16ft_1_scaffold_9973_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10664..11125
DNA (462bp) protein (154aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
RifSed_csp1_16ft_1_scaffold_9973_20
unknown

Not on your lists

comp(11122..11274)
DNA (153bp) protein (51aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_9973_21
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11406..11714)
DNA (309bp) protein (103aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IDU9_ALIAT
fabG; short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEJ42603.1}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus; acidocaldarius).;"
RifSed_csp1_16ft_1_scaffold_9973_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12252..12683)
DNA (432bp) protein (144aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IZS7_FRASU
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
RifSed_csp1_16ft_1_scaffold_9973_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12816..13628)
DNA (813bp) protein (271aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_9973_24
RHI_RIF_OD1_06_38_11, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(13795..14457)
DNA (663bp) protein (221aa)
Ammonium transporter n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9J0_AMMDK
ammonium transporter
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_06_38_11_curated
RifSed_csp1_16ft_1_scaffold_9973_25
RHI_RIF_OD1_06_38_11, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(14589..14867)
DNA (279bp) protein (93aa)
Ammonium transporter n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8Z2_METB6
ammonium transporter
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_06_38_11_curated
Displaying 26 items

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