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RifSed_csp1_13ft_4_scaffold_460

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_4_scaffold_460_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..866)
DNA (864bp) protein (288aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036005F0
secY; protein translocase subunit SecY
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_4_scaffold_460_2

Not on your lists


comp(876..1310)
DNA (435bp) protein (145aa)
Ribosomal protein L15 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U5F2_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
RifSed_csp1_13ft_4_scaffold_460_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1310..1789)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003676426
rpl30p; 50S ribosomal protein L30P
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_460_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


comp(1786..2586)
DNA (801bp) protein (267aa)
30S ribosomal protein S5 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5J5_9EURY
rps5p; 30S ribosomal protein S5P
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_460_5

Not on your lists


comp(2586..3086)
DNA (501bp) protein (167aa)
50S ribosomal protein L18 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D4605
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18P
RifSed_csp1_13ft_4_scaffold_460_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3083..3547)
DNA (465bp) protein (155aa)
50S ribosomal protein L19e Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BI70_9EURY
LSU ribosomal protein L19E
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_460_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3547..4308)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000377A3F2
LSU ribosomal protein L32e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_460_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(4310..4855)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S6E9_METSF
50S ribosomal protein L6
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(4864..5253)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D309E
SSU ribosomal protein S15Ae (S8p)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_460_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(5263..5409)
DNA (147bp) protein (49aa)
30S ribosomal protein S14 type Z Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Y0_9EURY
rps14P; 30S ribosomal protein S14P
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(5406..5906)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000372A27B
LSU ribosomal protein L5P
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5915..6637)
DNA (723bp) protein (241aa)
30S ribosomal protein S4e Tax=Aciduliprofundum sp. (strain MAR08-339) PF6_ACIS0">RepID=L0HPF6_ACIS0
ribosomal protein S4E
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(6645..7004)
DNA (360bp) protein (120aa)
50S ribosomal protein L24P Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECF5_PYRF1
50S ribosomal protein L24
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(7014..7412)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
50S ribosomal protein L14P
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_15

Not on your lists


comp(7409..7615)
DNA (207bp) protein (69aa)
30S ribosomal protein S17P Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB39_ACIB4
Archaeal ribosomal protein S17P {ECO:0000313|EMBL:AJS13147.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
RifSed_csp1_13ft_4_scaffold_460_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7785..8036)
DNA (252bp) protein (84aa)
Ribonuclease P protein component 1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB83_METSL
ribonuclease P protein component 1
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(8075..8287)
DNA (213bp) protein (71aa)
50S ribosomal protein L29P Tax=Euryarchaeota RepID=M9SFE9_9EURY
LSU ribosomal protein L35e (L29p)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_18

Not on your lists


comp(8322..9206)
DNA (885bp) protein (295aa)
30S ribosomal protein S3 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I7_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3P
RifSed_csp1_13ft_4_scaffold_460_19

Not on your lists


comp(9208..9663)
DNA (456bp) protein (152aa)
50S ribosomal protein L22 Tax=Methanomassiliicoccus luminyensis RepID=UPI000366A406
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl22p; 50S ribosomal protein L22
RifSed_csp1_13ft_4_scaffold_460_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


comp(9671..10138)
DNA (468bp) protein (156aa)
30S ribosomal protein S19P Tax=Euryarchaeota RepID=M9SJ65_9EURY
30S ribosomal protein S19
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_4_scaffold_460_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(10145..10852)
DNA (708bp) protein (236aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000381615B
ribosomal protein L2
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(10852..11139)
DNA (288bp) protein (96aa)
50S ribosomal protein L23P Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T519_9EURY
50S ribosomal protein L23P
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(11136..12005)
DNA (870bp) protein (290aa)
50S ribosomal protein L4 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I4_9EURY
rpl4lp; 50S ribosomal protein L4P
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_24

Not on your lists


comp(12122..13123)
DNA (1002bp) protein (334aa)
50S ribosomal protein L3 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8W8_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl3p; 50S ribosomal protein L3P
RifSed_csp1_13ft_4_scaffold_460_25
unknown

Not on your lists

comp(13360..13566)
DNA (207bp) protein (69aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_460_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13715..14275
DNA (561bp) protein (187aa)
Putative Ras family protein Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14428..14970
DNA (543bp) protein (181aa)
Putative Ras family protein Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_28
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

15101..17101
DNA (2001bp) protein (667aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D1C16
ATP-dependent protease Lon
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_460_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17151..17696
DNA (546bp) protein (182aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGE4_ACIB4
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_460_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17701..19119)
DNA (1419bp) protein (473aa)
Putative membrane protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKQ9_ACIS0
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 33 in total

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